(9 nodes) SKP1/BTB/POZ domain superfamily network (Entamoeba histolytica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	62.t00027	Skp1 protein, putative; Belongs to the SKP1 family. (162 aa)
	EHI_152700	Uncharacterized protein; Belongs to the SKP1 family. (98 aa)
	EHI_065310	Glycoprotein FP21, putative; Belongs to the SKP1 family. (160 aa)
	217.t00009	Uncharacterized protein. (712 aa)
	232.t00001	Uncharacterized protein. (538 aa)
	181.t00006	Skp1 protein, putative; Belongs to the SKP1 family. (158 aa)
	130.t00015	Bromodomain protein, putative. (394 aa)
	153.t00018	S-phase kinase-associated protein 1A, putative; Belongs to the SKP1 family. (158 aa)
	201.t00014	Uncharacterized protein. (364 aa)

Your Current Organism:

Entamoeba histolytica

NCBI taxonomy Id: 5759
Other names: E. histolytica

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
153.t00018	EHI_152700	C4M0Y3	B1N2G0	S-phase kinase-associated protein 1A, putative; Belongs to the SKP1 family.	Uncharacterized protein; Belongs to the SKP1 family.	0.690
181.t00006	EHI_152700	C4M261	B1N2G0	Skp1 protein, putative; Belongs to the SKP1 family.	Uncharacterized protein; Belongs to the SKP1 family.	0.690
62.t00027	EHI_152700	C4LYL7	B1N2G0	Skp1 protein, putative; Belongs to the SKP1 family.	Uncharacterized protein; Belongs to the SKP1 family.	0.690
EHI_065310	EHI_152700	B1N401	B1N2G0	Glycoprotein FP21, putative; Belongs to the SKP1 family.	Uncharacterized protein; Belongs to the SKP1 family.	0.690
EHI_152700	153.t00018	B1N2G0	C4M0Y3	Uncharacterized protein; Belongs to the SKP1 family.	S-phase kinase-associated protein 1A, putative; Belongs to the SKP1 family.	0.690
EHI_152700	181.t00006	B1N2G0	C4M261	Uncharacterized protein; Belongs to the SKP1 family.	Skp1 protein, putative; Belongs to the SKP1 family.	0.690
EHI_152700	62.t00027	B1N2G0	C4LYL7	Uncharacterized protein; Belongs to the SKP1 family.	Skp1 protein, putative; Belongs to the SKP1 family.	0.690
EHI_152700	EHI_065310	B1N2G0	B1N401	Uncharacterized protein; Belongs to the SKP1 family.	Glycoprotein FP21, putative; Belongs to the SKP1 family.	0.690