(24 nodes) Ribosomal protein S5 domain 2-type fold network (Entamoeba histolytica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	117.t00038	3' exoribonuclease family protein. (227 aa)
	92.t00009	Heat shock protein 90, putative. (718 aa)
	296.t00008	Uncharacterized protein. (232 aa)
	EHI_164510	Elongation factor 2. (841 aa)
	EHI_021380	U5 small nuclear ribonucleoprotein subunit, putative. (954 aa)
	27.t00040	40S ribosomal protein S16, putative; Belongs to the universal ribosomal protein uS9 family. (157 aa)
	EHI_166810	Elongation factor 2. (874 aa)
	285.t00010	40S ribosomal protein S16, putative; Belongs to the universal ribosomal protein uS9 family. (158 aa)
	256.t00015	90 kDa heat shock protein, putative. (711 aa)
	146.t00025	DNA mismatch repair protein MLH1, putative. (702 aa)
	187.t00004	Elongation factor 2. (841 aa)
	144.t00006	3' exoribonuclease family protein. (238 aa)
	75.t00036	3' exoribonuclease family protein. (265 aa)
	7.t00020	40S ribosomal protein S16, putative; Belongs to the universal ribosomal protein uS9 family. (158 aa)
	91.t00009	Exosome complex exonuclease, putative. (265 aa)
	8.t00008	U5 small nuclear ribonucleoprotein subunit, putative. (954 aa)
	361.t00008	40S ribosomal protein S2, putative; Belongs to the universal ribosomal protein uS5 family. (255 aa)
	180.t00014	3' exoribonuclease family protein. (223 aa)
	92.t00037	Heat shock protein 90, putative. (718 aa)
	138.t00004	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks. (1349 aa)
	349.t00010	Galactokinase, putative. (389 aa)
	14.t00051	Uncharacterized protein. (285 aa)
	23.t00018	Elongation factor 2, putative. (880 aa)
	207.t00012	DNA mismatch repair protein PMS1, putative. (876 aa)

Your Current Organism:

Entamoeba histolytica

NCBI taxonomy Id: 5759
Other names: E. histolytica

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
117.t00038	138.t00004	C4LW17	Q6RCM0	3' exoribonuclease family protein.	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	0.412
117.t00038	144.t00006	C4LW17	C4M2G1	3' exoribonuclease family protein.	3' exoribonuclease family protein.	0.822
117.t00038	180.t00014	C4LW17	C4M8Y9	3' exoribonuclease family protein.	3' exoribonuclease family protein.	0.996
117.t00038	296.t00008	C4LW17	C4LV31	3' exoribonuclease family protein.	Uncharacterized protein.	0.540
117.t00038	361.t00008	C4LW17	C4M7U0	3' exoribonuclease family protein.	40S ribosomal protein S2, putative; Belongs to the universal ribosomal protein uS5 family.	0.605
117.t00038	75.t00036	C4LW17	C4M182	3' exoribonuclease family protein.	3' exoribonuclease family protein.	0.997
117.t00038	91.t00009	C4LW17	C4LZA9	3' exoribonuclease family protein.	Exosome complex exonuclease, putative.	0.996
138.t00004	117.t00038	Q6RCM0	C4LW17	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	3' exoribonuclease family protein.	0.412
138.t00004	144.t00006	Q6RCM0	C4M2G1	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	3' exoribonuclease family protein.	0.412
138.t00004	146.t00025	Q6RCM0	C4M5R1	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	DNA mismatch repair protein MLH1, putative.	0.635
138.t00004	180.t00014	Q6RCM0	C4M8Y9	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	3' exoribonuclease family protein.	0.417
138.t00004	187.t00004	Q6RCM0	C4M4N3	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	Elongation factor 2.	0.597
138.t00004	207.t00012	Q6RCM0	C4LW71	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	DNA mismatch repair protein PMS1, putative.	0.502
138.t00004	23.t00018	Q6RCM0	C4LWB7	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	Elongation factor 2, putative.	0.786
138.t00004	256.t00015	Q6RCM0	C4M3S9	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	90 kDa heat shock protein, putative.	0.426
138.t00004	361.t00008	Q6RCM0	C4M7U0	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	40S ribosomal protein S2, putative; Belongs to the universal ribosomal protein uS5 family.	0.764
138.t00004	8.t00008	Q6RCM0	C4M7P1	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	U5 small nuclear ribonucleoprotein subunit, putative.	0.457
138.t00004	92.t00009	Q6RCM0	C4LVB2	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	Heat shock protein 90, putative.	0.420
138.t00004	92.t00037	Q6RCM0	C4MBP1	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	Heat shock protein 90, putative.	0.428
138.t00004	EHI_021380	Q6RCM0	B1N373	DNA topoisomerase 2; Control of topological states of DNA by transient breakage and subsequent rejoining of DNA strands. Topoisomerase II makes double- strand breaks.	U5 small nuclear ribonucleoprotein subunit, putative.	0.436