(75 nodes) Formation of the ternary complex, and subsequently, the 43S complex network (Entamoeba histolytica)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	266.t00007	Eukaryotic translation initiation factor 2 gamma subunit, putative. (470 aa)
	103.t00025	Eukaryotic translation initiation factor 2 alpha subunit, putative. (299 aa)
	65.t00021	40S ribosomal protein S15, putative; Belongs to the universal ribosomal protein uS19 family. (144 aa)
	4.t00098	40S ribosomal protein S17, putative. (117 aa)
	4.t00076	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (237 aa)
	153.t00009	40S ribosomal protein S17, putative. (117 aa)
	68.t00024	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (144 aa)
	285.t00010	40S ribosomal protein S16, putative; Belongs to the universal ribosomal protein uS9 family. (158 aa)
	EHI_086120	40S ribosomal protein S18, putative; Belongs to the universal ribosomal protein uS13 family. (143 aa)
	206.t00010	Uncharacterized protein. (614 aa)
	8.t00016	40S ribosomal protein S20, putative. (118 aa)
	172.t00009	Uncharacterized protein. (664 aa)
	350.t00007	40S ribosomal protein S24, putative. (140 aa)
	247.t00012	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (132 aa)
	878.t00001	40S ribosomal protein SA; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. (254 aa)
	472.t00007	40S ribosomal protein S23, putative; Belongs to the universal ribosomal protein uS12 family. (141 aa)
	30.t00042	40S ribosomal protein S20, putative. (118 aa)
	119.t00009	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (256 aa)
	213.t00002	40S ribosomal protein S15, putative; Belongs to the universal ribosomal protein uS19 family. (144 aa)
	277.t00011	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (144 aa)
	454.t00001	40S ribosomal protein S15, putative; Belongs to the universal ribosomal protein uS19 family. (144 aa)
	359.t00010	40S ribosomal protein S17, putative. (117 aa)
	361.t00008	40S ribosomal protein S2, putative; Belongs to the universal ribosomal protein uS5 family. (255 aa)
	229.t00012	Uncharacterized protein. (275 aa)
	158.t00013	40S ribosomal protein S27a, putative. (139 aa)
	180.t00013	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family. (237 aa)
	302.t00008	40S ribosomal protein S11, putative; Belongs to the universal ribosomal protein uS17 family. (156 aa)
	319.t00003	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (137 aa)
	4.t00067	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (201 aa)
	EHI_112880	40S ribosomal protein S13, putative; Belongs to the universal ribosomal protein uS15 family. (148 aa)
	350.t00006	40S ribosomal protein S19, putative. (155 aa)
	175.t00020	Uncharacterized protein. (232 aa)
	201.t00012	40S ribosomal protein S28, putative. (69 aa)
	289.t00016	Uncharacterized protein. (204 aa)
	11.t00056	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family. (185 aa)
	17.t00001	40S ribosomal protein S13, putative; Belongs to the universal ribosomal protein uS15 family. (151 aa)
	79.t00027	40S ribosomal protein S14, putative; Belongs to the universal ribosomal protein uS11 family. (146 aa)
	EHI_051580	Uncharacterized protein. (184 aa)
	27.t00040	40S ribosomal protein S16, putative; Belongs to the universal ribosomal protein uS9 family. (157 aa)
	EHI_118170	40S ribosomal protein S4, putative. (318 aa)
	EHI_124190	Uncharacterized protein. (408 aa)
	EHI_140540	40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. (196 aa)
	EHI_057850	40S ribosomal protein S4, putative. (197 aa)
	EHI_199990	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (269 aa)
	13.t00002	40S ribosomal protein S12, putative. (136 aa)
	13.t00028	Translation initiation factor 2 beta subunit, putative. (201 aa)
	6.t00003	40S ribosomal protein S27. (95 aa)
	260.t00009	40S ribosomal protein S3, putative. (244 aa)
	1.t00073	40S ribosomal protein S24, putative. (140 aa)
	127.t00006	40S ribosomal protein S27. (84 aa)
	64.t00024	40S ribosomal protein S5, putative; Belongs to the universal ribosomal protein uS7 family. (206 aa)
	425.t00009	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family. (256 aa)
	15.t00006	Uncharacterized protein. (213 aa)
	15.t00021	40S ribosomal protein S9, putative. (185 aa)
	186.t00020	60S ribosomal protein L40, putative. (56 aa)
	92.t00039	40S ribosomal protein S10, putative. (127 aa)
	118.t00025	Translation initiation factor eIF-1A, putative. (171 aa)
	160.t00011	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family. (132 aa)
	221.t00002	40S ribosomal protein S5, putative; Belongs to the universal ribosomal protein uS7 family. (205 aa)
	117.t00031	Ribosomal protein S29, putative. (56 aa)
	23.t00056	40S ribosomal protein S11, putative; Belongs to the universal ribosomal protein uS17 family. (156 aa)
	34.t00044	40S ribosomal protein S19, putative. (155 aa)
	159.t00023	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family. (86 aa)
	224.t00012	40S ribosomal protein S15a, putative; Belongs to the universal ribosomal protein uS8 family. (130 aa)
	526.t00002	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (266 aa)
	20.t00028	40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family. (137 aa)
	370.t00006	40S ribosomal protein S4, putative. (326 aa)
	62.t00024	WD domain containing protein. (327 aa)
	238.t00008	40S ribosomal protein S27. (84 aa)
	94.t00019	40S ribosomal protein S18, putative; Belongs to the universal ribosomal protein uS13 family. (155 aa)
	91.t00010	40S ribosomal protein S6; Belongs to the eukaryotic ribosomal protein eS6 family. (266 aa)
	64.t00007	RNA recognition motif domain containing protein. (414 aa)
	7.t00020	40S ribosomal protein S16, putative; Belongs to the universal ribosomal protein uS9 family. (158 aa)
	108.t00003	40S ribosomal protein S28, putative. (69 aa)
	7.t00047	40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. (144 aa)

Your Current Organism:

Entamoeba histolytica

NCBI taxonomy Id: 5759
Other names: E. histolytica

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
1.t00073	103.t00025	C4LT49	C4M0A4	40S ribosomal protein S24, putative.	Eukaryotic translation initiation factor 2 alpha subunit, putative.	0.987
1.t00073	108.t00003	C4LT49	C4LZQ8	40S ribosomal protein S24, putative.	40S ribosomal protein S28, putative.	0.985
1.t00073	11.t00056	C4LT49	O15612	40S ribosomal protein S24, putative.	40S ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.	0.981
1.t00073	117.t00031	C4LT49	C4LW10	40S ribosomal protein S24, putative.	Ribosomal protein S29, putative.	0.997
1.t00073	118.t00025	C4LT49	C4LVH5	40S ribosomal protein S24, putative.	Translation initiation factor eIF-1A, putative.	0.978
1.t00073	119.t00009	C4LT49	C4M609	40S ribosomal protein S24, putative.	40S ribosomal protein S3a; Belongs to the eukaryotic ribosomal protein eS1 family.	0.985
1.t00073	127.t00006	C4LT49	C4LT66	40S ribosomal protein S24, putative.	40S ribosomal protein S27.	0.955
1.t00073	13.t00002	C4LT49	C4LSC4	40S ribosomal protein S24, putative.	40S ribosomal protein S12, putative.	0.957
1.t00073	13.t00028	C4LT49	C4LSD9	40S ribosomal protein S24, putative.	Translation initiation factor 2 beta subunit, putative.	0.976
1.t00073	15.t00006	C4LT49	C4LUV3	40S ribosomal protein S24, putative.	Uncharacterized protein.	0.919
1.t00073	15.t00021	C4LT49	C4LUW3	40S ribosomal protein S24, putative.	40S ribosomal protein S9, putative.	0.981
1.t00073	153.t00009	C4LT49	C4M0Z2	40S ribosomal protein S24, putative.	40S ribosomal protein S17, putative.	0.960
1.t00073	158.t00013	C4LT49	C4M8F6	40S ribosomal protein S24, putative.	40S ribosomal protein S27a, putative.	0.995
1.t00073	159.t00023	C4LT49	C4LWW3	40S ribosomal protein S24, putative.	40S ribosomal protein S21; Belongs to the eukaryotic ribosomal protein eS21 family.	0.996
1.t00073	160.t00011	C4LT49	C4LVN9	40S ribosomal protein S24, putative.	40S ribosomal protein S12; Belongs to the eukaryotic ribosomal protein eS12 family.	0.955
1.t00073	17.t00001	C4LT49	A0A175JJM9	40S ribosomal protein S24, putative.	40S ribosomal protein S13, putative; Belongs to the universal ribosomal protein uS15 family.	0.957
1.t00073	172.t00009	C4LT49	C4M4M5	40S ribosomal protein S24, putative.	Uncharacterized protein.	0.881
1.t00073	175.t00020	C4LT49	C4MAK5	40S ribosomal protein S24, putative.	Uncharacterized protein.	0.936
1.t00073	180.t00013	C4LT49	C4M8Y8	40S ribosomal protein S24, putative.	40S ribosomal protein S8; Belongs to the eukaryotic ribosomal protein eS8 family.	0.958
1.t00073	186.t00020	C4LT49	C4LV09	40S ribosomal protein S24, putative.	60S ribosomal protein L40, putative.	0.961