STRINGSTRING
HDAC HDAC 337.t00002 337.t00002 11.t00020 11.t00020 258.t00007 258.t00007
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
HDACHistone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily. (448 aa)
337.t00002Autophagy-related protein. (129 aa)
11.t00020Aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (529 aa)
258.t00007Autophagy-related protein. (134 aa)
Your Current Organism:
Entamoeba histolytica
NCBI taxonomy Id: 5759
Other names: E. histolytica
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