STRINGSTRING
SDY21599.1 SDY21599.1 SDY26977.1 SDY26977.1 SDY10639.1 SDY10639.1 lcdH lcdH cobB cobB SDY66653.1 SDY66653.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
SDY21599.1Short chain enoyl-CoA hydratase. (649 aa)
SDY26977.1Enoyl-CoA hydratase/carnithine racemase. (700 aa)
SDY10639.13-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. (732 aa)
lcdHCarnitine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine. (491 aa)
cobBNAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily. (227 aa)
SDY66653.13-hydroxyacyl-CoA dehydrogenase. (291 aa)
Your Current Organism:
Lentibacter algarum
NCBI taxonomy Id: 576131
Other names: CGMCC 1.10234, L. algarum, LMG 24861, LMG:24861, Lentibacter algarum Li et al. 2012, alpha proteobacterium ZXM098, alpha proteobacterium ZXM100, strain ZXM100
Server load: low (32%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.