34 items (Lentibacter algarum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

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protein homology

Your Input:
	SDY50992.1	Uncharacterized domain 1-containing protein. (147 aa)
	SDY49742.1	Amidase. (470 aa)
	SDY48287.1	Hippurate hydrolase. (387 aa)
	SDY48268.1	Hippurate hydrolase. (385 aa)
	SDY40212.1	Aromatic-amino-acid transaminase. (395 aa)
	SDY25120.1	Hippurate hydrolase. (388 aa)
	SDY25095.1	Hippurate hydrolase. (389 aa)
	SDY76299.1	Aromatic amino acid aminotransferase apoenzyme. (394 aa)
	SDY24139.1	aromatic-L-amino-acid decarboxylase. (469 aa)
	SDY22270.1	oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase. (668 aa)
	SDY22250.1	Enoyl-CoA hydratase. (261 aa)
	SDY22231.1	acyl-CoA thioesterase. (145 aa)
	SDY22219.1	phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA). (436 aa)
	SDY22179.1	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE. (356 aa)
	SDY22170.1	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD. (152 aa)
	SDY22150.1	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC. (250 aa)
	SDY22130.1	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB. (94 aa)
	SDY22116.1	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA. (330 aa)
	SDY72611.1	Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (266 aa)
	SDY66653.1	3-hydroxyacyl-CoA dehydrogenase. (291 aa)
	fdhD	FdhD protein; Required for formate dehydrogenase (FDH) activity. Acts as a sulfur carrier protein that transfers sulfur from IscS to the molybdenum cofactor prior to its insertion into FDH. Belongs to the FdhD family. (293 aa)
	hisC	Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (360 aa)
	SDY66110.1	Uncharacterized domain 1-containing protein. (163 aa)
	SDY10848.1	Acyl-coenzyme A thioesterase PaaI, contains HGG motif. (170 aa)
	katG	Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. (720 aa)
	SDY28023.1	Amidohydrolase. (388 aa)
	hisC-2	Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. (365 aa)
	SDY72318.1	D-alanine transaminase. (287 aa)
	SDY65300.1	Histidinol-phosphate aminotransferase. (341 aa)
	SDY68598.1	phenylacetate-CoA ligase. (406 aa)
	SDY65259.1	Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. (261 aa)
	SDY57926.1	Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (260 aa)
	SDY55831.1	Amidase/6-aminohexanoate-cyclic-dimer hydrolase; Belongs to the amidase family. (487 aa)
	SDY52182.1	FeS assembly SUF system protein. (120 aa)

Your Current Organism:

Lentibacter algarum

NCBI taxonomy Id: 576131
Other names: CGMCC 1.10234, L. algarum, LMG 24861, LMG:24861, Lentibacter algarum Li et al. 2012, alpha proteobacterium ZXM098, alpha proteobacterium ZXM100, strain ZXM100

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
SDY10848.1	SDY22179.1	SAMN05444486_101232	SAMN05444486_101836	Acyl-coenzyme A thioesterase PaaI, contains HGG motif.	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.	0.514
SDY22116.1	SDY22130.1	SAMN05444486_101832	SAMN05444486_101833	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.	0.999
SDY22116.1	SDY22150.1	SAMN05444486_101832	SAMN05444486_101834	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC.	0.999
SDY22116.1	SDY22170.1	SAMN05444486_101832	SAMN05444486_101835	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD.	0.999
SDY22116.1	SDY22179.1	SAMN05444486_101832	SAMN05444486_101836	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.	0.997
SDY22116.1	SDY22219.1	SAMN05444486_101832	SAMN05444486_101838	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.	phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).	0.846
SDY22116.1	SDY22231.1	SAMN05444486_101832	SAMN05444486_101839	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.	acyl-CoA thioesterase.	0.978
SDY22116.1	SDY22250.1	SAMN05444486_101832	SAMN05444486_101840	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.	Enoyl-CoA hydratase.	0.932
SDY22116.1	SDY22270.1	SAMN05444486_101832	SAMN05444486_101841	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.	oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase.	0.936
SDY22116.1	SDY52182.1	SAMN05444486_101832	SAMN05444486_102581	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.	FeS assembly SUF system protein.	0.596
SDY22116.1	SDY57926.1	SAMN05444486_101832	SAMN05444486_102873	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.	Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.929
SDY22116.1	SDY66110.1	SAMN05444486_101832	SAMN05444486_10366	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.	Uncharacterized domain 1-containing protein.	0.447
SDY22116.1	SDY66653.1	SAMN05444486_101832	SAMN05444486_10395	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.	3-hydroxyacyl-CoA dehydrogenase.	0.663
SDY22116.1	SDY68598.1	SAMN05444486_101832	SAMN05444486_103206	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.	phenylacetate-CoA ligase.	0.759
SDY22116.1	SDY72611.1	SAMN05444486_101832	SAMN05444486_103436	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.	Enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family.	0.894
SDY22130.1	SDY22116.1	SAMN05444486_101833	SAMN05444486_101832	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.	0.999
SDY22130.1	SDY22150.1	SAMN05444486_101833	SAMN05444486_101834	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC.	0.999
SDY22130.1	SDY22170.1	SAMN05444486_101833	SAMN05444486_101835	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD.	0.998
SDY22130.1	SDY22179.1	SAMN05444486_101833	SAMN05444486_101836	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.	0.999
SDY22130.1	SDY22219.1	SAMN05444486_101833	SAMN05444486_101838	ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.	phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).	0.823

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