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lcdH lcdH SDY25611.1 SDY25611.1 SDY25633.1 SDY25633.1 SDY08183.1 SDY08183.1 SDY26977.1 SDY26977.1 SDY10120.1 SDY10120.1 SDY10639.1 SDY10639.1 SDY10682.1 SDY10682.1 SDY12301.1 SDY12301.1 SDY12328.1 SDY12328.1 SDY06651.1 SDY06651.1 SDY81828.1 SDY81828.1 SDY66653.1 SDY66653.1 SDY76890.1 SDY76890.1 SDY76178.1 SDY76178.1 SDY75219.1 SDY75219.1 SDY74548.1 SDY74548.1 SDY72572.1 SDY72572.1 SDY70427.1 SDY70427.1 SDY65259.1 SDY65259.1 SDY57535.1 SDY57535.1 SDY52925.1 SDY52925.1 SDY49839.1 SDY49839.1 SDY49814.1 SDY49814.1 SDY44636.1 SDY44636.1 SDY42203.1 SDY42203.1 SDY42098.1 SDY42098.1 SDY23907.1 SDY23907.1 SDY23895.1 SDY23895.1 SDY22097.1 SDY22097.1 SDY22037.1 SDY22037.1 SDY21599.1 SDY21599.1 SDY06169.1 SDY06169.1 SDY18477.1 SDY18477.1 SDY18434.1 SDY18434.1 SDY18419.1 SDY18419.1 SDY18397.1 SDY18397.1 SDY17090.1 SDY17090.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
lcdHCarnitine 3-dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of L-carnitine to 3- dehydrocarnitine. (491 aa)
SDY25611.1hydroxymethylglutaryl-CoA lyase. (288 aa)
SDY25633.1methylglutaconyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (260 aa)
SDY08183.1acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
SDY26977.1Enoyl-CoA hydratase/carnithine racemase. (700 aa)
SDY10120.1Enoyl-CoA hydratase/carnithine racemase. (254 aa)
SDY10639.13-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase. (732 aa)
SDY10682.1acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (403 aa)
SDY12301.13-oxoacid CoA-transferase subunit B. (207 aa)
SDY12328.13-oxoacid CoA-transferase subunit A. (237 aa)
SDY06651.1Sulfoacetaldehyde acetyltransferase; Belongs to the TPP enzyme family. (591 aa)
SDY81828.1acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (390 aa)
SDY66653.13-hydroxyacyl-CoA dehydrogenase. (291 aa)
SDY76890.1Acetolactate synthase large subunit; Belongs to the TPP enzyme family. (540 aa)
SDY76178.1Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. (201 aa)
SDY75219.1Acetolactate synthase-1/2/3 large subunit; Belongs to the TPP enzyme family. (529 aa)
SDY74548.1crotonobetainyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (259 aa)
SDY72572.1NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family. (239 aa)
SDY70427.1Acyl dehydratase. (154 aa)
SDY65259.1Enoyl-CoA hydratase/carnithine racemase; Belongs to the enoyl-CoA hydratase/isomerase family. (261 aa)
SDY57535.1Enoyl-CoA hydratase/carnithine racemase. (259 aa)
SDY52925.1Enoyl-CoA hydratase/carnithine racemase. (348 aa)
SDY49839.1Acetolactate synthase, large subunit. (584 aa)
SDY49814.1Acetolactate synthase, small subunit. (189 aa)
SDY44636.1Maleate isomerase. (244 aa)
SDY42203.13-hydroxybutyryl-CoA dehydratase. (147 aa)
SDY42098.1acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (391 aa)
SDY23907.1Polyhydroxyalkanoate synthase. (597 aa)
SDY23895.1Poly(3-hydroxybutyrate) depolymerase. (428 aa)
SDY22097.1Hypothetical protein; Belongs to the thiolase-like superfamily. Thiolase family. (401 aa)
SDY22037.1NADP-dependent 3-hydroxy acid dehydrogenase YdfG; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (256 aa)
SDY21599.1Short chain enoyl-CoA hydratase. (649 aa)
SDY06169.1enoyl-CoA hydratase; Belongs to the enoyl-CoA hydratase/isomerase family. (258 aa)
SDY18477.1Succinate dehydrogenase subunit B; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. (261 aa)
SDY18434.1Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily. (601 aa)
SDY18419.1Succinate dehydrogenase subunit D. (123 aa)
SDY18397.1Succinate dehydrogenase subunit C. (127 aa)
SDY17090.1Enoyl-CoA hydratase/carnithine racemase. (266 aa)
Your Current Organism:
Lentibacter algarum
NCBI taxonomy Id: 576131
Other names: CGMCC 1.10234, L. algarum, LMG 24861, LMG:24861, Lentibacter algarum Li et al. 2012, alpha proteobacterium ZXM098, alpha proteobacterium ZXM100, strain ZXM100
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