STRINGSTRING
D2UZ21_NAEGR D2UZ21_NAEGR D2UZQ1_NAEGR D2UZQ1_NAEGR D2VBE2_NAEGR D2VBE2_NAEGR D2VY47_NAEGR D2VY47_NAEGR D2W352_NAEGR D2W352_NAEGR
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
D2UZ21_NAEGRPredicted protein. (223 aa)
D2UZQ1_NAEGRPredicted protein; Belongs to the FPP/GGPP synthase family. (310 aa)
D2VBE2_NAEGRIsopentenyl diphosphate isomerase. (256 aa)
D2VY47_NAEGRPredicted protein. (226 aa)
D2W352_NAEGRDiphosphomevalonate decarboxylase; Performs the first committed step in the biosynthesis of isoprenes. (391 aa)
Your Current Organism:
Naegleria gruberi
NCBI taxonomy Id: 5762
Other names: N. gruberi
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