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YTM1 YTM1 THITE_2108513 THITE_2108513 THITE_2106953 THITE_2106953 THITE_2114134 THITE_2114134 THITE_2114270 THITE_2114270 THITE_66080 THITE_66080 THITE_2113437 THITE_2113437 THITE_2118650 THITE_2118650 THITE_2118737 THITE_2118737 THITE_2118961 THITE_2118961 THITE_2119436 THITE_2119436 NOP7 NOP7 THITE_2121217 THITE_2121217 ERB1 ERB1 THITE_2124343 THITE_2124343 THITE_2124801 THITE_2124801
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
YTM1Ribosome biogenesis protein YTM1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (485 aa)
THITE_2108513Protein MAK16; Belongs to the MAK16 family. (334 aa)
THITE_2106953Uncharacterized protein. (419 aa)
THITE_2114134SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. (712 aa)
THITE_2114270Uncharacterized protein. (395 aa)
THITE_66080Uncharacterized protein. (232 aa)
THITE_2113437CP-type G domain-containing protein. (567 aa)
THITE_2118650Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes. (275 aa)
THITE_2118737Brix domain-containing protein. (429 aa)
THITE_211896160S ribosome subunit biogenesis protein NIP7; Required for proper 27S pre-rRNA processing and 60S ribosome subunit assembly; Belongs to the NIP7 family. (183 aa)
THITE_2119436Nucleolar complex-associated protein 3; Required for synthesis of 60S ribosomal subunits and the transport of pre-ribosomes from the nucleoplasm to the cytoplasm. Belongs to the CBF/MAK21 family. (689 aa)
NOP7Pescadillo homolog; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (679 aa)
THITE_2121217Uncharacterized protein. (802 aa)
ERB1Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. (782 aa)
THITE_2124343RRM domain-containing protein. (383 aa)
THITE_2124801RNA helicase. (594 aa)
Your Current Organism:
Thermothielavioides terrestris
NCBI taxonomy Id: 578455
Other names: T. terrestris NRRL 8126, Thermothielavioides terrestris NRRL 8126
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