14 items (Thermothielavioides terrestris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	THITE_2118310	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (128 aa)
	THITE_2124427	CID domain-containing protein. (596 aa)
	THITE_2171686	Uncharacterized protein. (78 aa)
	THITE_2121633	RRM domain-containing protein. (332 aa)
	THITE_2057738	Uncharacterized protein. (281 aa)
	THITE_2121120	DUF3453 domain-containing protein. (747 aa)
	THITE_2118582	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (265 aa)
	THITE_2108539	Uncharacterized protein. (629 aa)
	THITE_2108809	Uncharacterized protein. (606 aa)
	THITE_2115805	SAP30_Sin3_bdg domain-containing protein. (189 aa)
	THITE_2116183	Fip1 domain-containing protein. (344 aa)
	THITE_2017867	TFIIS-type domain-containing protein; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (117 aa)
	THITE_2117338	Cleavage and polyadenylation specificity factor subunit 2. (1015 aa)
	THITE_2123200	Uncharacterized protein. (859 aa)

Your Current Organism:

Thermothielavioides terrestris

NCBI taxonomy Id: 578455
Other names: T. terrestris NRRL 8126, Thermothielavioides terrestris NRRL 8126

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
THITE_2017867	THITE_2118310	G2R4X1	G2R9N3	TFIIS-type domain-containing protein; Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.593
THITE_2057738	THITE_2108539	G2REL1	G2QRN3	Uncharacterized protein.	Uncharacterized protein.	0.998
THITE_2057738	THITE_2108809	G2REL1	G2QSJ7	Uncharacterized protein.	Uncharacterized protein.	0.466
THITE_2057738	THITE_2116183	G2REL1	G2R0B6	Uncharacterized protein.	Fip1 domain-containing protein.	0.999
THITE_2057738	THITE_2117338	G2REL1	G2R7X9	Uncharacterized protein.	Cleavage and polyadenylation specificity factor subunit 2.	0.999
THITE_2057738	THITE_2118310	G2REL1	G2R9N3	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.559
THITE_2057738	THITE_2118582	G2REL1	G2RAC2	Uncharacterized protein.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.953
THITE_2057738	THITE_2121120	G2REL1	G2REF8	Uncharacterized protein.	DUF3453 domain-containing protein.	0.999
THITE_2057738	THITE_2121633	G2REL1	G2RF51	Uncharacterized protein.	RRM domain-containing protein.	0.985
THITE_2057738	THITE_2123200	G2REL1	G2RGZ7	Uncharacterized protein.	Uncharacterized protein.	0.999
THITE_2057738	THITE_2124427	G2REL1	G2RFU0	Uncharacterized protein.	CID domain-containing protein.	0.844
THITE_2057738	THITE_2171686	G2REL1	G2RFT9	Uncharacterized protein.	Uncharacterized protein.	0.844
THITE_2108539	THITE_2057738	G2QRN3	G2REL1	Uncharacterized protein.	Uncharacterized protein.	0.998
THITE_2108539	THITE_2116183	G2QRN3	G2R0B6	Uncharacterized protein.	Fip1 domain-containing protein.	0.991
THITE_2108539	THITE_2117338	G2QRN3	G2R7X9	Uncharacterized protein.	Cleavage and polyadenylation specificity factor subunit 2.	0.997
THITE_2108539	THITE_2121120	G2QRN3	G2REF8	Uncharacterized protein.	DUF3453 domain-containing protein.	0.977
THITE_2108539	THITE_2121633	G2QRN3	G2RF51	Uncharacterized protein.	RRM domain-containing protein.	0.918
THITE_2108539	THITE_2123200	G2QRN3	G2RGZ7	Uncharacterized protein.	Uncharacterized protein.	0.998
THITE_2108539	THITE_2124427	G2QRN3	G2RFU0	Uncharacterized protein.	CID domain-containing protein.	0.742
THITE_2108539	THITE_2171686	G2QRN3	G2RFT9	Uncharacterized protein.	Uncharacterized protein.	0.742