12 items (Thermothielavioides terrestris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	THITE_27406	UBIQUITIN_CONJUGAT_2 domain-containing protein. (159 aa)
	THITE_2121518	AAA domain-containing protein. (1434 aa)
	THITE_2114020	Uncharacterized protein. (1266 aa)
	THITE_2116916	J domain-containing protein. (521 aa)
	THITE_2121000	RING-type domain-containing protein. (430 aa)
	THITE_2121278	Pex2_Pex12 domain-containing protein. (515 aa)
	THITE_2115356	WD_REPEATS_REGION domain-containing protein. (365 aa)
	THITE_2115270	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-. (942 aa)
	THITE_2112341	TPR_REGION domain-containing protein. (653 aa)
	THITE_2047491	Pex2_Pex12 domain-containing protein. (430 aa)
	THITE_2109847	Pex14_N domain-containing protein. (358 aa)
	THITE_2121469	SH3 domain-containing protein. (446 aa)

Your Current Organism:

Thermothielavioides terrestris

NCBI taxonomy Id: 578455
Other names: T. terrestris NRRL 8126, Thermothielavioides terrestris NRRL 8126

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
THITE_2047491	THITE_2109847	G2QYF1	G2QY17	Pex2_Pex12 domain-containing protein.	Pex14_N domain-containing protein.	0.926
THITE_2047491	THITE_2112341	G2QYF1	G2QYL1	Pex2_Pex12 domain-containing protein.	TPR_REGION domain-containing protein.	0.984
THITE_2047491	THITE_2114020	G2QYF1	G2R560	Pex2_Pex12 domain-containing protein.	Uncharacterized protein.	0.885
THITE_2047491	THITE_2115270	G2QYF1	G2R3W7	Pex2_Pex12 domain-containing protein.	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-.	0.461
THITE_2047491	THITE_2115356	G2QYF1	G2R416	Pex2_Pex12 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.875
THITE_2047491	THITE_2121000	G2QYF1	G2RE53	Pex2_Pex12 domain-containing protein.	RING-type domain-containing protein.	0.998
THITE_2047491	THITE_2121278	G2QYF1	G2RER2	Pex2_Pex12 domain-containing protein.	Pex2_Pex12 domain-containing protein.	0.686
THITE_2047491	THITE_2121469	G2QYF1	G2REY2	Pex2_Pex12 domain-containing protein.	SH3 domain-containing protein.	0.961
THITE_2047491	THITE_2121518	G2QYF1	G2RF06	Pex2_Pex12 domain-containing protein.	AAA domain-containing protein.	0.832
THITE_2047491	THITE_27406	G2QYF1	G2REZ9	Pex2_Pex12 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.929
THITE_2109847	THITE_2047491	G2QY17	G2QYF1	Pex14_N domain-containing protein.	Pex2_Pex12 domain-containing protein.	0.926
THITE_2109847	THITE_2112341	G2QY17	G2QYL1	Pex14_N domain-containing protein.	TPR_REGION domain-containing protein.	0.999
THITE_2109847	THITE_2114020	G2QY17	G2R560	Pex14_N domain-containing protein.	Uncharacterized protein.	0.884
THITE_2109847	THITE_2115270	G2QY17	G2R3W7	Pex14_N domain-containing protein.	Lon protease homolog 2, peroxisomal; ATP-dependent serine protease that mediates the selective degradation of misfolded and unassembled polypeptides in the peroxisomal matrix. Necessary for type 2 peroxisome targeting signal (PTS2)-containing protein processing and facilitates peroxisome matrix protein import; Belongs to the peptidase S16 family. ECO:0000256\|PROSITE-.	0.474
THITE_2109847	THITE_2115356	G2QY17	G2R416	Pex14_N domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.958
THITE_2109847	THITE_2121000	G2QY17	G2RE53	Pex14_N domain-containing protein.	RING-type domain-containing protein.	0.914
THITE_2109847	THITE_2121469	G2QY17	G2REY2	Pex14_N domain-containing protein.	SH3 domain-containing protein.	0.999
THITE_2109847	THITE_2121518	G2QY17	G2RF06	Pex14_N domain-containing protein.	AAA domain-containing protein.	0.936
THITE_2109847	THITE_27406	G2QY17	G2REZ9	Pex14_N domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.820
THITE_2112341	THITE_2047491	G2QYL1	G2QYF1	TPR_REGION domain-containing protein.	Pex2_Pex12 domain-containing protein.	0.984