21 items (Thermothielavioides terrestris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	THITE_2169616	UCR_hinge domain-containing protein. (146 aa)
	THITE_2061620	RanBD1 domain-containing protein. (809 aa)
	THITE_2108580	Uncharacterized protein. (881 aa)
	THITE_2106953	Uncharacterized protein. (419 aa)
	THITE_2108853	WD_REPEATS_REGION domain-containing protein. (318 aa)
	THITE_2107113	GAR domain-containing protein. (989 aa)
	THITE_108034	NTF2 domain-containing protein. (187 aa)
	THITE_2169483	WD_REPEATS_REGION domain-containing protein. (357 aa)
	THITE_2109549	Uncharacterized protein. (954 aa)
	THITE_2108187	Importin N-terminal domain-containing protein. (945 aa)
	THITE_2171639	ADF-H domain-containing protein; Belongs to the actin-binding proteins ADF family. (155 aa)
	THITE_2122249	MPN domain-containing protein. (337 aa)
	THITE_2151251	Uncharacterized protein. (351 aa)
	THITE_2118487	ANAPC4 domain-containing protein. (582 aa)
	THITE_2118479	Uncharacterized protein. (139 aa)
	THITE_2090942	Proteasome subunit alpha type. (270 aa)
	THITE_2088919	Uncharacterized protein. (159 aa)
	THITE_2117546	WD_REPEATS_REGION domain-containing protein. (547 aa)
	THITE_2116509	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes. (524 aa)
	THITE_2115099	SAC domain-containing protein. (1164 aa)
	THITE_2115304	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (904 aa)

Your Current Organism:

Thermothielavioides terrestris

NCBI taxonomy Id: 578455
Other names: T. terrestris NRRL 8126, Thermothielavioides terrestris NRRL 8126

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
THITE_2061620	THITE_2151251	G2QR04	G2RAV1	RanBD1 domain-containing protein.	Uncharacterized protein.	0.480
THITE_2061620	THITE_2169483	G2QR04	G2QSZ9	RanBD1 domain-containing protein.	WD_REPEATS_REGION domain-containing protein.	0.480
THITE_2090942	THITE_2115304	G2R905	G2R3Y4	Proteasome subunit alpha type.	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.994
THITE_2090942	THITE_2122249	G2R905	G2RCI1	Proteasome subunit alpha type.	MPN domain-containing protein.	0.997
THITE_2108187	THITE_2108580	G2QXW4	G2QRP7	Importin N-terminal domain-containing protein.	Uncharacterized protein.	0.574
THITE_2108580	THITE_2108187	G2QRP7	G2QXW4	Uncharacterized protein.	Importin N-terminal domain-containing protein.	0.574
THITE_2115304	THITE_2090942	G2R3Y4	G2R905	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	Proteasome subunit alpha type.	0.994
THITE_2115304	THITE_2122249	G2R3Y4	G2RCI1	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	MPN domain-containing protein.	0.999
THITE_2116509	THITE_2122249	G2R6F0	G2RCI1	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.	MPN domain-containing protein.	0.422
THITE_2122249	THITE_2090942	G2RCI1	G2R905	MPN domain-containing protein.	Proteasome subunit alpha type.	0.997
THITE_2122249	THITE_2115304	G2RCI1	G2R3Y4	MPN domain-containing protein.	26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.	0.999
THITE_2122249	THITE_2116509	G2RCI1	G2R6F0	MPN domain-containing protein.	DNA damage-binding protein CMR1; DNA-binding protein that binds to both single- and double- stranded DNA. Binds preferentially to UV-damaged DNA. May be involved in DNA-metabolic processes.	0.422
THITE_2151251	THITE_2061620	G2RAV1	G2QR04	Uncharacterized protein.	RanBD1 domain-containing protein.	0.480
THITE_2151251	THITE_2169483	G2RAV1	G2QSZ9	Uncharacterized protein.	WD_REPEATS_REGION domain-containing protein.	0.905
THITE_2169483	THITE_2061620	G2QSZ9	G2QR04	WD_REPEATS_REGION domain-containing protein.	RanBD1 domain-containing protein.	0.480
THITE_2169483	THITE_2151251	G2QSZ9	G2RAV1	WD_REPEATS_REGION domain-containing protein.	Uncharacterized protein.	0.905