38 items (Thermothielavioides terrestris) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	THITE_2030109	RRM domain-containing protein. (74 aa)
	CLP1	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. (506 aa)
	THITE_2112930	Uncharacterized protein. (529 aa)
	THITE_2116183	Fip1 domain-containing protein. (344 aa)
	THITE_2112508	U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family. (563 aa)
	THITE_2114118	Sm domain-containing protein. (211 aa)
	THITE_162738	SAP domain-containing protein. (292 aa)
	THITE_2106446	Uncharacterized protein. (277 aa)
	THITE_2110808	RRM domain-containing protein. (193 aa)
	THITE_57872	Small nuclear ribonucleoprotein Sm D3. (114 aa)
	THITE_2041028	Glycoside hydrolase family 16 protein. (380 aa)
	THITE_2109917	RRM domain-containing protein. (195 aa)
	THITE_2109910	RRM domain-containing protein. (76 aa)
	THITE_2123920	Uncharacterized protein. (152 aa)
	THITE_2091621	C3H1-type domain-containing protein. (499 aa)
	THITE_2057473	PWI domain-containing protein. (124 aa)
	THITE_2091571	Uncharacterized protein. (231 aa)
	THITE_2121633	RRM domain-containing protein. (332 aa)
	THITE_2081698	Uncharacterized protein. (391 aa)
	THITE_2171686	Uncharacterized protein. (78 aa)
	THITE_2124427	CID domain-containing protein. (596 aa)
	THITE_2122924	Uncharacterized protein. (617 aa)
	THITE_2120901	Uncharacterized protein. (214 aa)
	THITE_2122649	Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (90 aa)
	THITE_2120569	Small nuclear ribonucleoprotein G. (83 aa)
	THITE_2092090	Uncharacterized protein. (353 aa)
	THITE_2055001	Uncharacterized protein. (319 aa)
	THITE_2119239	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (652 aa)
	THITE_2118582	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (265 aa)
	THITE_2120207	Guanylate kinase-like domain-containing protein. (765 aa)
	THITE_2120199	G-patch_2 domain-containing protein. (313 aa)
	THITE_2117546	WD_REPEATS_REGION domain-containing protein. (547 aa)
	THITE_2117439	Uncharacterized protein. (361 aa)
	THITE_2117327	TPR_REGION domain-containing protein. (1086 aa)
	THITE_2116478	Uncharacterized protein. (626 aa)
	THITE_2047808	Uncharacterized protein. (1221 aa)
	THITE_2111492	CCHC-type domain-containing protein. (430 aa)
	THITE_2113108	Uncharacterized protein. (339 aa)

Your Current Organism:

Thermothielavioides terrestris

NCBI taxonomy Id: 578455
Other names: T. terrestris NRRL 8126, Thermothielavioides terrestris NRRL 8126

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CLP1	THITE_162738	G2R124	G2QXV5	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	SAP domain-containing protein.	0.655
CLP1	THITE_2030109	G2R124	G2R1E0	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	RRM domain-containing protein.	0.689
CLP1	THITE_2047808	G2R124	G2R4Z0	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Uncharacterized protein.	0.732
CLP1	THITE_2055001	G2R124	G2RBU4	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Uncharacterized protein.	0.428
CLP1	THITE_2081698	G2R124	G2RF55	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Uncharacterized protein.	0.656
CLP1	THITE_2091621	G2R124	G2REE9	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	C3H1-type domain-containing protein.	0.428
CLP1	THITE_2092090	G2R124	G2RCF0	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Uncharacterized protein.	0.428
CLP1	THITE_2109910	G2R124	G2QQV2	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	RRM domain-containing protein.	0.690
CLP1	THITE_2109917	G2R124	G2QQV3	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	RRM domain-containing protein.	0.690
CLP1	THITE_2110808	G2R124	G2QUJ6	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	RRM domain-containing protein.	0.638
CLP1	THITE_2113108	G2R124	G2R1W9	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Uncharacterized protein.	0.655
CLP1	THITE_2116183	G2R124	G2R0B6	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Fip1 domain-containing protein.	0.928
CLP1	THITE_2116478	G2R124	G2R660	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Uncharacterized protein.	0.428
CLP1	THITE_2117327	G2R124	G2R7X0	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	TPR_REGION domain-containing protein.	0.939
CLP1	THITE_2117439	G2R124	G2R823	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Uncharacterized protein.	0.554
CLP1	THITE_2118582	G2R124	G2RAC2	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...]	0.818
CLP1	THITE_2119239	G2R124	G2RBI1	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's.	0.821
CLP1	THITE_2120199	G2R124	G2R9T5	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	G-patch_2 domain-containing protein.	0.428
CLP1	THITE_2120901	G2R124	G2RE20	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	Uncharacterized protein.	0.666
CLP1	THITE_2121633	G2R124	G2RF51	mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation.	RRM domain-containing protein.	0.993