STRINGSTRING
THITE_2123200 THITE_2123200 THITE_2108624 THITE_2108624 THITE_57872 THITE_57872 THITE_2110808 THITE_2110808 THITE_2106446 THITE_2106446 THITE_2114118 THITE_2114118 THITE_2116183 THITE_2116183 CLP1 CLP1 THITE_2047808 THITE_2047808 THITE_2117327 THITE_2117327 THITE_2117338 THITE_2117338 THITE_2123920 THITE_2123920 THITE_2119830 THITE_2119830 THITE_2118582 THITE_2118582 THITE_42108 THITE_42108 THITE_2119239 THITE_2119239 THITE_2120569 THITE_2120569 THITE_2122649 THITE_2122649 THITE_2121120 THITE_2121120 THITE_2057738 THITE_2057738 THITE_2121311 THITE_2121311 THITE_2121633 THITE_2121633 THITE_2171686 THITE_2171686 THITE_2124427 THITE_2124427 THITE_2122924 THITE_2122924
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
THITE_2123200Uncharacterized protein. (859 aa)
THITE_2108624Uncharacterized protein. (837 aa)
THITE_57872Small nuclear ribonucleoprotein Sm D3. (114 aa)
THITE_2110808RRM domain-containing protein. (193 aa)
THITE_2106446Uncharacterized protein. (277 aa)
THITE_2114118Sm domain-containing protein. (211 aa)
THITE_2116183Fip1 domain-containing protein. (344 aa)
CLP1mRNA cleavage and polyadenylation factor CLP1; Required for endonucleolytic cleavage during polyadenylation- dependent pre-mRNA 3'-end formation. (506 aa)
THITE_2047808Uncharacterized protein. (1221 aa)
THITE_2117327TPR_REGION domain-containing protein. (1086 aa)
THITE_2117338Cleavage and polyadenylation specificity factor subunit 2. (1015 aa)
THITE_2123920Uncharacterized protein. (152 aa)
THITE_2119830WD_REPEATS_REGION domain-containing protein. (689 aa)
THITE_2118582Cleavage and polyadenylation specificity factor subunit 5; Component of the cleavage factor Im (CFIm) complex that functions as an activator of the pre-mRNA 3'-end cleavage and polyadenylation processing required for the maturation of pre-mRNA into functional mRNAs. CFIm contributes to the recruitment of multiprotein complexes on specific sequences on the pre-mRNA 3'-end, so called cleavage and polyadenylation signals (pA signals). Most pre-mRNAs contain multiple pA signals, resulting in alternative cleavage and polyadenylation (APA) producing mRNAs with variable 3'-end formation. The [...] (265 aa)
THITE_42108Nuclear cap-binding protein subunit 2. (188 aa)
THITE_2119239Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. (652 aa)
THITE_2120569Small nuclear ribonucleoprotein G. (83 aa)
THITE_2122649Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (90 aa)
THITE_2121120DUF3453 domain-containing protein. (747 aa)
THITE_2057738Uncharacterized protein. (281 aa)
THITE_2121311CPSF_A domain-containing protein. (1460 aa)
THITE_2121633RRM domain-containing protein. (332 aa)
THITE_2171686Uncharacterized protein. (78 aa)
THITE_2124427CID domain-containing protein. (596 aa)
THITE_2122924Uncharacterized protein. (617 aa)
Your Current Organism:
Thermothielavioides terrestris
NCBI taxonomy Id: 578455
Other names: T. terrestris NRRL 8126, Thermothielavioides terrestris NRRL 8126
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