(13 nodes) Mismatch repair network (Schizophyllum commune)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D8PJT5_SCHCM	Uncharacterized protein. (816 aa)
	D8PKW7_SCHCM	Uncharacterized protein. (164 aa)
	D8PL73_SCHCM	DNA_MISMATCH_REPAIR_2 domain-containing protein. (837 aa)
	D8PLP9_SCHCM	XPGI domain-containing protein. (341 aa)
	D8PMS7_SCHCM	DNA_MISMATCH_REPAIR_2 domain-containing protein. (981 aa)
	D8PWR0_SCHCM	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1152 aa)
	D8PXB0_SCHCM	Uncharacterized protein. (1049 aa)
	D8Q7M4_SCHCM	MutL_C domain-containing protein. (462 aa)
	D8Q8X1_SCHCM	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (965 aa)
	D8QDM7_SCHCM	Uncharacterized protein. (277 aa)
	D8QEA6_SCHCM	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1206 aa)
	D8QEB2_SCHCM	Uncharacterized protein. (316 aa)
	D8QEE1_SCHCM	DNA_mis_repair domain-containing protein. (731 aa)

Your Current Organism:

Schizophyllum commune

NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8PJT5_SCHCM	D8PL73_SCHCM	D8PJT5	D8PL73	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.910
D8PJT5_SCHCM	D8PLP9_SCHCM	D8PJT5	D8PLP9	Uncharacterized protein.	XPGI domain-containing protein.	0.594
D8PJT5_SCHCM	D8PMS7_SCHCM	D8PJT5	D8PMS7	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.852
D8PJT5_SCHCM	D8PWR0_SCHCM	D8PJT5	D8PWR0	Uncharacterized protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.915
D8PJT5_SCHCM	D8PXB0_SCHCM	D8PJT5	D8PXB0	Uncharacterized protein.	Uncharacterized protein.	0.901
D8PJT5_SCHCM	D8Q7M4_SCHCM	D8PJT5	D8Q7M4	Uncharacterized protein.	MutL_C domain-containing protein.	0.797
D8PJT5_SCHCM	D8Q8X1_SCHCM	D8PJT5	D8Q8X1	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.938
D8PJT5_SCHCM	D8QDM7_SCHCM	D8PJT5	D8QDM7	Uncharacterized protein.	Uncharacterized protein.	0.594
D8PJT5_SCHCM	D8QEA6_SCHCM	D8PJT5	D8QEA6	Uncharacterized protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.916
D8PJT5_SCHCM	D8QEB2_SCHCM	D8PJT5	D8QEB2	Uncharacterized protein.	Uncharacterized protein.	0.594
D8PJT5_SCHCM	D8QEE1_SCHCM	D8PJT5	D8QEE1	Uncharacterized protein.	DNA_mis_repair domain-containing protein.	0.996
D8PKW7_SCHCM	D8PL73_SCHCM	D8PKW7	D8PL73	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.815
D8PKW7_SCHCM	D8PLP9_SCHCM	D8PKW7	D8PLP9	Uncharacterized protein.	XPGI domain-containing protein.	0.508
D8PKW7_SCHCM	D8PMS7_SCHCM	D8PKW7	D8PMS7	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.771
D8PKW7_SCHCM	D8PWR0_SCHCM	D8PKW7	D8PWR0	Uncharacterized protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.815
D8PKW7_SCHCM	D8PXB0_SCHCM	D8PKW7	D8PXB0	Uncharacterized protein.	Uncharacterized protein.	0.807
D8PKW7_SCHCM	D8Q7M4_SCHCM	D8PKW7	D8Q7M4	Uncharacterized protein.	MutL_C domain-containing protein.	0.446
D8PKW7_SCHCM	D8Q8X1_SCHCM	D8PKW7	D8Q8X1	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.771
D8PKW7_SCHCM	D8QDM7_SCHCM	D8PKW7	D8QDM7	Uncharacterized protein.	Uncharacterized protein.	0.508
D8PKW7_SCHCM	D8QEA6_SCHCM	D8PKW7	D8QEA6	Uncharacterized protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.815