(14 nodes) Mismatched DNA binding network (Schizophyllum commune)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D8PSJ8_SCHCM	C2H2-type domain-containing protein. (234 aa)
	D8QEE1_SCHCM	DNA_mis_repair domain-containing protein. (731 aa)
	D8QEA6_SCHCM	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1206 aa)
	D8QDJ2_SCHCM	Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. (483 aa)
	D8Q8X1_SCHCM	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR). (965 aa)
	D8Q7M4_SCHCM	MutL_C domain-containing protein. (462 aa)
	D8PXB0_SCHCM	Uncharacterized protein. (1049 aa)
	D8PWR0_SCHCM	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR). (1152 aa)
	D8PV31_SCHCM	Uncharacterized protein. (1362 aa)
	D8PSJ9_SCHCM	C2H2-type domain-containing protein. (258 aa)
	D8PMS7_SCHCM	DNA_MISMATCH_REPAIR_2 domain-containing protein. (981 aa)
	D8PL73_SCHCM	DNA_MISMATCH_REPAIR_2 domain-containing protein. (837 aa)
	EXP1	EXP1-like protein. (526 aa)
	D8PJT5_SCHCM	Uncharacterized protein. (816 aa)

Your Current Organism:

Schizophyllum commune

NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8PJT5_SCHCM	D8PL73_SCHCM	D8PJT5	D8PL73	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.910
D8PJT5_SCHCM	D8PMS7_SCHCM	D8PJT5	D8PMS7	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.852
D8PJT5_SCHCM	D8PV31_SCHCM	D8PJT5	D8PV31	Uncharacterized protein.	Uncharacterized protein.	0.580
D8PJT5_SCHCM	D8PWR0_SCHCM	D8PJT5	D8PWR0	Uncharacterized protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.915
D8PJT5_SCHCM	D8PXB0_SCHCM	D8PJT5	D8PXB0	Uncharacterized protein.	Uncharacterized protein.	0.901
D8PJT5_SCHCM	D8Q7M4_SCHCM	D8PJT5	D8Q7M4	Uncharacterized protein.	MutL_C domain-containing protein.	0.797
D8PJT5_SCHCM	D8Q8X1_SCHCM	D8PJT5	D8Q8X1	Uncharacterized protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.938
D8PJT5_SCHCM	D8QEA6_SCHCM	D8PJT5	D8QEA6	Uncharacterized protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.916
D8PJT5_SCHCM	D8QEE1_SCHCM	D8PJT5	D8QEE1	Uncharacterized protein.	DNA_mis_repair domain-containing protein.	0.996
D8PL73_SCHCM	D8PJT5_SCHCM	D8PL73	D8PJT5	DNA_MISMATCH_REPAIR_2 domain-containing protein.	Uncharacterized protein.	0.910
D8PL73_SCHCM	D8PMS7_SCHCM	D8PL73	D8PMS7	DNA_MISMATCH_REPAIR_2 domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.551
D8PL73_SCHCM	D8PV31_SCHCM	D8PL73	D8PV31	DNA_MISMATCH_REPAIR_2 domain-containing protein.	Uncharacterized protein.	0.613
D8PL73_SCHCM	D8PWR0_SCHCM	D8PL73	D8PWR0	DNA_MISMATCH_REPAIR_2 domain-containing protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.522
D8PL73_SCHCM	D8PXB0_SCHCM	D8PL73	D8PXB0	DNA_MISMATCH_REPAIR_2 domain-containing protein.	Uncharacterized protein.	0.998
D8PL73_SCHCM	D8Q7M4_SCHCM	D8PL73	D8Q7M4	DNA_MISMATCH_REPAIR_2 domain-containing protein.	MutL_C domain-containing protein.	0.916
D8PL73_SCHCM	D8Q8X1_SCHCM	D8PL73	D8Q8X1	DNA_MISMATCH_REPAIR_2 domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.551
D8PL73_SCHCM	D8QEA6_SCHCM	D8PL73	D8QEA6	DNA_MISMATCH_REPAIR_2 domain-containing protein.	DNA mismatch repair protein; Component of the post-replicative DNA mismatch repair system (MMR).	0.557
D8PL73_SCHCM	D8QEE1_SCHCM	D8PL73	D8QEE1	DNA_MISMATCH_REPAIR_2 domain-containing protein.	DNA_mis_repair domain-containing protein.	0.904
D8PMS7_SCHCM	D8PJT5_SCHCM	D8PMS7	D8PJT5	DNA_MISMATCH_REPAIR_2 domain-containing protein.	Uncharacterized protein.	0.852
D8PMS7_SCHCM	D8PL73_SCHCM	D8PMS7	D8PL73	DNA_MISMATCH_REPAIR_2 domain-containing protein.	DNA_MISMATCH_REPAIR_2 domain-containing protein.	0.551