30 items (Schizophyllum commune) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	D8PK30_SCHCM	Uncharacterized protein. (294 aa)
	D8PKP9_SCHCM	EXOSC1 domain-containing protein. (185 aa)
	D8PKX0_SCHCM	Uncharacterized protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family. (1480 aa)
	D8PLS8_SCHCM	RNase_PH domain-containing protein. (206 aa)
	D8PNN0_SCHCM	3'-5' exonuclease domain-containing protein. (644 aa)
	D8PQ10_SCHCM	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'. (922 aa)
	D8PSV9_SCHCM	Brix domain-containing protein. (272 aa)
	D8PSZ7_SCHCM	Uncharacterized protein. (259 aa)
	PAN2	PAN2-PAN3 deadenylation complex catalytic subunit PAN2; Catalytic subunit of the poly(A)-nuclease (PAN) deadenylation complex, one of two cytoplasmic mRNA deadenylases involved in mRNA turnover. PAN specifically shortens poly(A) tails of RNA and the activity is stimulated by poly(A)-binding protein PAB1. PAN deadenylation is followed by rapid degradation of the shortened mRNA tails by the CCR4-NOT complex. Deadenylated mRNAs are then degraded by two alternative mechanisms, namely exosome-mediated 3'-5' exonucleolytic degradation, or deadenlyation-dependent mRNA decaping and subsequent [...] (1239 aa)
	D8PWH4_SCHCM	Exonuclease domain-containing protein. (369 aa)
	D8PWT2_SCHCM	Uncharacterized protein. (1020 aa)
	D8PX61_SCHCM	KH_dom_type_1 domain-containing protein. (175 aa)
	D8PXF3_SCHCM	Uncharacterized protein. (346 aa)
	D8PXG0_SCHCM	Uncharacterized protein. (258 aa)
	D8PXT0_SCHCM	Uncharacterized protein. (97 aa)
	USB1	U6 snRNA phosphodiesterase; Phosphodiesterase responsible for the U6 snRNA 3' end processing. Acts as an exoribonuclease (RNase) responsible for trimming the poly(U) tract of the last nucleotides in the pre-U6 snRNA molecule, leading to the formation of mature U6 snRNA; Belongs to the 2H phosphoesterase superfamily. USB1 family. (324 aa)
	D8Q282_SCHCM	RNase_PH domain-containing protein. (291 aa)
	D8Q2K4_SCHCM	Uncharacterized protein. (281 aa)
	D8Q3R1_SCHCM	RNB domain-containing protein. (903 aa)
	D8Q5Q3_SCHCM	Uncharacterized protein. (609 aa)
	D8Q6Z4_SCHCM	RNase_PH domain-containing protein. (341 aa)
	D8Q9U5_SCHCM	Exonuclease domain-containing protein. (208 aa)
	D8QAX6_SCHCM	Exonuclease domain-containing protein. (622 aa)
	D8QBS7_SCHCM	Endo/exonuclease/phosphatase domain-containing protein. (645 aa)
	D8QCR3_SCHCM	Uncharacterized protein. (625 aa)
	D8QDL8_SCHCM	Endo/exonuclease/phosphatase domain-containing protein. (322 aa)
	D8QH23_SCHCM	Uncharacterized protein; Belongs to the RNR ribonuclease family. (988 aa)
	D8QK70_SCHCM	3'-5' exonuclease domain-containing protein. (297 aa)
	D8QKU0_SCHCM	3'-5' exonuclease domain-containing protein. (357 aa)
	D8QM04_SCHCM	RNase_PH domain-containing protein. (259 aa)

Your Current Organism:

Schizophyllum commune

NCBI taxonomy Id: 578458
Other names: S. commune H4-8, Schizophyllum commune H4-8

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
D8PK30_SCHCM	D8PKP9_SCHCM	D8PK30	D8PKP9	Uncharacterized protein.	EXOSC1 domain-containing protein.	0.998
D8PK30_SCHCM	D8PLS8_SCHCM	D8PK30	D8PLS8	Uncharacterized protein.	RNase_PH domain-containing protein.	0.998
D8PK30_SCHCM	D8PQ10_SCHCM	D8PK30	D8PQ10	Uncharacterized protein.	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.	0.920
D8PK30_SCHCM	D8PSZ7_SCHCM	D8PK30	D8PSZ7	Uncharacterized protein.	Uncharacterized protein.	0.939
D8PK30_SCHCM	D8PWT2_SCHCM	D8PK30	D8PWT2	Uncharacterized protein.	Uncharacterized protein.	0.983
D8PK30_SCHCM	D8PX61_SCHCM	D8PK30	D8PX61	Uncharacterized protein.	KH_dom_type_1 domain-containing protein.	0.987
D8PK30_SCHCM	D8PXG0_SCHCM	D8PK30	D8PXG0	Uncharacterized protein.	Uncharacterized protein.	0.998
D8PK30_SCHCM	D8Q282_SCHCM	D8PK30	D8Q282	Uncharacterized protein.	RNase_PH domain-containing protein.	0.998
D8PK30_SCHCM	D8Q2K4_SCHCM	D8PK30	D8Q2K4	Uncharacterized protein.	Uncharacterized protein.	0.998
D8PK30_SCHCM	D8Q3R1_SCHCM	D8PK30	D8Q3R1	Uncharacterized protein.	RNB domain-containing protein.	0.794
D8PK30_SCHCM	D8Q6Z4_SCHCM	D8PK30	D8Q6Z4	Uncharacterized protein.	RNase_PH domain-containing protein.	0.982
D8PK30_SCHCM	D8QAX6_SCHCM	D8PK30	D8QAX6	Uncharacterized protein.	Exonuclease domain-containing protein.	0.407
D8PK30_SCHCM	D8QH23_SCHCM	D8PK30	D8QH23	Uncharacterized protein.	Uncharacterized protein; Belongs to the RNR ribonuclease family.	0.995
D8PK30_SCHCM	D8QM04_SCHCM	D8PK30	D8QM04	Uncharacterized protein.	RNase_PH domain-containing protein.	0.982
D8PKP9_SCHCM	D8PK30_SCHCM	D8PKP9	D8PK30	EXOSC1 domain-containing protein.	Uncharacterized protein.	0.998
D8PKP9_SCHCM	D8PLS8_SCHCM	D8PKP9	D8PLS8	EXOSC1 domain-containing protein.	RNase_PH domain-containing protein.	0.999
D8PKP9_SCHCM	D8PQ10_SCHCM	D8PKP9	D8PQ10	EXOSC1 domain-containing protein.	DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of cytoplasmic mRNAs that have been deadenylated and subsequently uridylated at their 3'.	0.972
D8PKP9_SCHCM	D8PSV9_SCHCM	D8PKP9	D8PSV9	EXOSC1 domain-containing protein.	Brix domain-containing protein.	0.418
D8PKP9_SCHCM	D8PSZ7_SCHCM	D8PKP9	D8PSZ7	EXOSC1 domain-containing protein.	Uncharacterized protein.	0.999
D8PKP9_SCHCM	D8PWT2_SCHCM	D8PKP9	D8PWT2	EXOSC1 domain-containing protein.	Uncharacterized protein.	0.986