6 items (Rhodotorula graminis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	A0A0N8Q025	Adenosylhomocysteinase. (430 aa)
	A0A0P9EL42	Uncharacterized protein. (770 aa)
	A0A0P9EZ45	Uncharacterized protein. (510 aa)
	A0A0P9GG50	PALP domain-containing protein. (387 aa)
	A0A194S411	Uncharacterized protein. (741 aa)
	A0A194S9T5	PALP domain-containing protein. (382 aa)

Your Current Organism:

Rhodotorula graminis

NCBI taxonomy Id: 578459
Other names: R. graminis WP1, Rhodotorula graminis WP1

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
A0A0N8Q025	A0A0P9EL42	Adenosylhomocysteinase.	Uncharacterized protein.	0.979
A0A0N8Q025	A0A0P9EZ45	Adenosylhomocysteinase.	Uncharacterized protein.	0.914
A0A0N8Q025	A0A0P9GG50	Adenosylhomocysteinase.	PALP domain-containing protein.	0.913
A0A0N8Q025	A0A194S411	Adenosylhomocysteinase.	Uncharacterized protein.	0.931
A0A0N8Q025	A0A194S9T5	Adenosylhomocysteinase.	PALP domain-containing protein.	0.946
A0A0P9EL42	A0A0N8Q025	Uncharacterized protein.	Adenosylhomocysteinase.	0.979
A0A0P9EL42	A0A0P9EZ45	Uncharacterized protein.	Uncharacterized protein.	0.957
A0A0P9EL42	A0A0P9GG50	Uncharacterized protein.	PALP domain-containing protein.	0.907
A0A0P9EL42	A0A194S411	Uncharacterized protein.	Uncharacterized protein.	0.959
A0A0P9EL42	A0A194S9T5	Uncharacterized protein.	PALP domain-containing protein.	0.924
A0A0P9EZ45	A0A0N8Q025	Uncharacterized protein.	Adenosylhomocysteinase.	0.914
A0A0P9EZ45	A0A0P9EL42	Uncharacterized protein.	Uncharacterized protein.	0.957
A0A0P9EZ45	A0A0P9GG50	Uncharacterized protein.	PALP domain-containing protein.	0.963
A0A0P9EZ45	A0A194S411	Uncharacterized protein.	Uncharacterized protein.	0.935
A0A0P9EZ45	A0A194S9T5	Uncharacterized protein.	PALP domain-containing protein.	0.964
A0A0P9GG50	A0A0N8Q025	PALP domain-containing protein.	Adenosylhomocysteinase.	0.913
A0A0P9GG50	A0A0P9EL42	PALP domain-containing protein.	Uncharacterized protein.	0.907
A0A0P9GG50	A0A0P9EZ45	PALP domain-containing protein.	Uncharacterized protein.	0.963
A0A0P9GG50	A0A194S411	PALP domain-containing protein.	Uncharacterized protein.	0.968
A0A0P9GG50	A0A194S9T5	PALP domain-containing protein.	PALP domain-containing protein.	0.887