9 items (Nosema bombycis) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NBO_1055g0001	Nuclear pore protein. (606 aa)
	NU170	Nucleoporin NUP170. (253 aa)
	SEC13	Protein SEC13; Belongs to the WD repeat SEC13 family. (274 aa)
	NBO_52g0027	Nuclear pore protein. (760 aa)
	RAE1	Poly(A)+ RNA export protein. (326 aa)
	SEC13-2	Protein SEC13; Belongs to the WD repeat SEC13 family. (274 aa)
	NUP98-2	Nuclear pore complex protein Nup98-Nup96. (670 aa)
	NUP98-3	Nuclear pore complex protein Nup98-Nup96. (676 aa)
	NBO_441g0003	Uncharacterized protein. (330 aa)

Your Current Organism:

Nosema bombycis

NCBI taxonomy Id: 578461
Other names: N. bombycis CQ1, Nosema bombycis CQ1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
NBO_1055g0001	NU170	R0MFN1	R0KR14	Nuclear pore protein.	Nucleoporin NUP170.	0.983
NBO_1055g0001	NUP98-2	R0MFN1	R0MBV5	Nuclear pore protein.	Nuclear pore complex protein Nup98-Nup96.	0.830
NBO_1055g0001	NUP98-3	R0MFN1	R0MCC4	Nuclear pore protein.	Nuclear pore complex protein Nup98-Nup96.	0.830
NBO_1055g0001	RAE1	R0MFN1	R0KY76	Nuclear pore protein.	Poly(A)+ RNA export protein.	0.795
NBO_1055g0001	SEC13	R0MFN1	R0KVX2	Nuclear pore protein.	Protein SEC13; Belongs to the WD repeat SEC13 family.	0.912
NBO_1055g0001	SEC13-2	R0MFN1	R0KZ01	Nuclear pore protein.	Protein SEC13; Belongs to the WD repeat SEC13 family.	0.912
NBO_441g0003	NU170	R0MED3	R0KR14	Uncharacterized protein.	Nucleoporin NUP170.	0.983
NBO_441g0003	NUP98-2	R0MED3	R0MBV5	Uncharacterized protein.	Nuclear pore complex protein Nup98-Nup96.	0.830
NBO_441g0003	NUP98-3	R0MED3	R0MCC4	Uncharacterized protein.	Nuclear pore complex protein Nup98-Nup96.	0.830
NBO_441g0003	RAE1	R0MED3	R0KY76	Uncharacterized protein.	Poly(A)+ RNA export protein.	0.795
NBO_441g0003	SEC13	R0MED3	R0KVX2	Uncharacterized protein.	Protein SEC13; Belongs to the WD repeat SEC13 family.	0.912
NBO_441g0003	SEC13-2	R0MED3	R0KZ01	Uncharacterized protein.	Protein SEC13; Belongs to the WD repeat SEC13 family.	0.912
NBO_52g0027	NU170	R0KT30	R0KR14	Nuclear pore protein.	Nucleoporin NUP170.	0.983
NBO_52g0027	NUP98-2	R0KT30	R0MBV5	Nuclear pore protein.	Nuclear pore complex protein Nup98-Nup96.	0.830
NBO_52g0027	NUP98-3	R0KT30	R0MCC4	Nuclear pore protein.	Nuclear pore complex protein Nup98-Nup96.	0.830
NBO_52g0027	RAE1	R0KT30	R0KY76	Nuclear pore protein.	Poly(A)+ RNA export protein.	0.795
NBO_52g0027	SEC13	R0KT30	R0KVX2	Nuclear pore protein.	Protein SEC13; Belongs to the WD repeat SEC13 family.	0.912
NBO_52g0027	SEC13-2	R0KT30	R0KZ01	Nuclear pore protein.	Protein SEC13; Belongs to the WD repeat SEC13 family.	0.912
NU170	NBO_1055g0001	R0KR14	R0MFN1	Nucleoporin NUP170.	Nuclear pore protein.	0.983
NU170	NBO_441g0003	R0KR14	R0MED3	Nucleoporin NUP170.	Uncharacterized protein.	0.983