12 items (Dictyostelium purpureum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F0ZYH1_DICPU	RNA polymerase III subunit. (338 aa)
	F0ZA80_DICPU	Uncharacterized protein. (144 aa)
	F0ZB01_DICPU	Uncharacterized protein. (129 aa)
	F0ZBH6_DICPU	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1586 aa)
	F0ZFA5_DICPU	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (141 aa)
	F0ZJ90_DICPU	Uncharacterized protein. (56 aa)
	F0ZJT3_DICPU	RNA_pol_L_2 domain-containing protein. (116 aa)
	F0ZQY1_DICPU	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (136 aa)
	F0ZR32_DICPU	RNA polymerase II core subunit. (196 aa)
	F0ZTF6_DICPU	Uncharacterized protein. (379 aa)
	F0ZVX5_DICPU	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1117 aa)
	F1A380_DICPU	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1598 aa)

Your Current Organism:

Dictyostelium purpureum

NCBI taxonomy Id: 5786
Other names: D. purpureum

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F0ZA80_DICPU	F0ZB01_DICPU	F0ZA80	F0ZB01	Uncharacterized protein.	Uncharacterized protein.	0.999
F0ZA80_DICPU	F0ZBH6_DICPU	F0ZA80	F0ZBH6	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.952
F0ZA80_DICPU	F0ZFA5_DICPU	F0ZA80	F0ZFA5	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
F0ZA80_DICPU	F0ZJ90_DICPU	F0ZA80	F0ZJ90	Uncharacterized protein.	Uncharacterized protein.	0.999
F0ZA80_DICPU	F0ZJT3_DICPU	F0ZA80	F0ZJT3	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.999
F0ZA80_DICPU	F0ZQY1_DICPU	F0ZA80	F0ZQY1	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
F0ZA80_DICPU	F0ZR32_DICPU	F0ZA80	F0ZR32	Uncharacterized protein.	RNA polymerase II core subunit.	0.999
F0ZA80_DICPU	F0ZTF6_DICPU	F0ZA80	F0ZTF6	Uncharacterized protein.	Uncharacterized protein.	0.999
F0ZA80_DICPU	F0ZVX5_DICPU	F0ZA80	F0ZVX5	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
F0ZA80_DICPU	F0ZYH1_DICPU	F0ZA80	F0ZYH1	Uncharacterized protein.	RNA polymerase III subunit.	0.999
F0ZA80_DICPU	F1A380_DICPU	F0ZA80	F1A380	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
F0ZB01_DICPU	F0ZA80_DICPU	F0ZB01	F0ZA80	Uncharacterized protein.	Uncharacterized protein.	0.999
F0ZB01_DICPU	F0ZBH6_DICPU	F0ZB01	F0ZBH6	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
F0ZB01_DICPU	F0ZFA5_DICPU	F0ZB01	F0ZFA5	Uncharacterized protein.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
F0ZB01_DICPU	F0ZJ90_DICPU	F0ZB01	F0ZJ90	Uncharacterized protein.	Uncharacterized protein.	0.999
F0ZB01_DICPU	F0ZJT3_DICPU	F0ZB01	F0ZJT3	Uncharacterized protein.	RNA_pol_L_2 domain-containing protein.	0.999
F0ZB01_DICPU	F0ZQY1_DICPU	F0ZB01	F0ZQY1	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.997
F0ZB01_DICPU	F0ZR32_DICPU	F0ZB01	F0ZR32	Uncharacterized protein.	RNA polymerase II core subunit.	0.999
F0ZB01_DICPU	F0ZTF6_DICPU	F0ZB01	F0ZTF6	Uncharacterized protein.	Uncharacterized protein.	0.999
F0ZB01_DICPU	F0ZVX5_DICPU	F0ZB01	F0ZVX5	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999