7 items (Dictyostelium purpureum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F0ZNV7_DICPU	Hydroxymethylglutaryl-CoA lyase. (387 aa)
	F0ZMZ5_DICPU	Mitochondrial isovaleryl-CoA dehydrogenase. (411 aa)
	F0ZJ63_DICPU	Methylcrotonyl-CoA carboxylase. (689 aa)
	F0ZDY0_DICPU	Dihydrolipoyl dehydrogenase. (490 aa)
	F0ZBR2_DICPU	Uncharacterized protein. (638 aa)
	F0ZWJ0_DICPU	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family. (303 aa)
	F0ZP18_DICPU	Uncharacterized protein. (574 aa)

Your Current Organism:

Dictyostelium purpureum

NCBI taxonomy Id: 5786
Other names: D. purpureum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F0ZBR2_DICPU	F0ZDY0_DICPU	F0ZBR2	F0ZDY0	Uncharacterized protein.	Dihydrolipoyl dehydrogenase.	0.517
F0ZBR2_DICPU	F0ZJ63_DICPU	F0ZBR2	F0ZJ63	Uncharacterized protein.	Methylcrotonyl-CoA carboxylase.	0.619
F0ZBR2_DICPU	F0ZNV7_DICPU	F0ZBR2	F0ZNV7	Uncharacterized protein.	Hydroxymethylglutaryl-CoA lyase.	0.539
F0ZBR2_DICPU	F0ZP18_DICPU	F0ZBR2	F0ZP18	Uncharacterized protein.	Uncharacterized protein.	0.664
F0ZBR2_DICPU	F0ZWJ0_DICPU	F0ZBR2	F0ZWJ0	Uncharacterized protein.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.752
F0ZDY0_DICPU	F0ZBR2_DICPU	F0ZDY0	F0ZBR2	Dihydrolipoyl dehydrogenase.	Uncharacterized protein.	0.517
F0ZDY0_DICPU	F0ZMZ5_DICPU	F0ZDY0	F0ZMZ5	Dihydrolipoyl dehydrogenase.	Mitochondrial isovaleryl-CoA dehydrogenase.	0.517
F0ZJ63_DICPU	F0ZBR2_DICPU	F0ZJ63	F0ZBR2	Methylcrotonyl-CoA carboxylase.	Uncharacterized protein.	0.619
F0ZJ63_DICPU	F0ZMZ5_DICPU	F0ZJ63	F0ZMZ5	Methylcrotonyl-CoA carboxylase.	Mitochondrial isovaleryl-CoA dehydrogenase.	0.960
F0ZJ63_DICPU	F0ZNV7_DICPU	F0ZJ63	F0ZNV7	Methylcrotonyl-CoA carboxylase.	Hydroxymethylglutaryl-CoA lyase.	0.729
F0ZJ63_DICPU	F0ZP18_DICPU	F0ZJ63	F0ZP18	Methylcrotonyl-CoA carboxylase.	Uncharacterized protein.	0.999
F0ZJ63_DICPU	F0ZWJ0_DICPU	F0ZJ63	F0ZWJ0	Methylcrotonyl-CoA carboxylase.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.956
F0ZMZ5_DICPU	F0ZDY0_DICPU	F0ZMZ5	F0ZDY0	Mitochondrial isovaleryl-CoA dehydrogenase.	Dihydrolipoyl dehydrogenase.	0.517
F0ZMZ5_DICPU	F0ZJ63_DICPU	F0ZMZ5	F0ZJ63	Mitochondrial isovaleryl-CoA dehydrogenase.	Methylcrotonyl-CoA carboxylase.	0.960
F0ZMZ5_DICPU	F0ZNV7_DICPU	F0ZMZ5	F0ZNV7	Mitochondrial isovaleryl-CoA dehydrogenase.	Hydroxymethylglutaryl-CoA lyase.	0.539
F0ZMZ5_DICPU	F0ZP18_DICPU	F0ZMZ5	F0ZP18	Mitochondrial isovaleryl-CoA dehydrogenase.	Uncharacterized protein.	0.965
F0ZMZ5_DICPU	F0ZWJ0_DICPU	F0ZMZ5	F0ZWJ0	Mitochondrial isovaleryl-CoA dehydrogenase.	Uncharacterized protein; Belongs to the enoyl-CoA hydratase/isomerase family.	0.752
F0ZNV7_DICPU	F0ZBR2_DICPU	F0ZNV7	F0ZBR2	Hydroxymethylglutaryl-CoA lyase.	Uncharacterized protein.	0.539
F0ZNV7_DICPU	F0ZJ63_DICPU	F0ZNV7	F0ZJ63	Hydroxymethylglutaryl-CoA lyase.	Methylcrotonyl-CoA carboxylase.	0.729
F0ZNV7_DICPU	F0ZMZ5_DICPU	F0ZNV7	F0ZMZ5	Hydroxymethylglutaryl-CoA lyase.	Mitochondrial isovaleryl-CoA dehydrogenase.	0.539