7 items (Dictyostelium purpureum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	F0ZHV1_DICPU	Uncharacterized protein. (416 aa)
	F0ZBR2_DICPU	Uncharacterized protein. (638 aa)
	F0ZHD4_DICPU	Uncharacterized protein. (422 aa)
	F0Z7G3_DICPU	Uncharacterized protein. (419 aa)
	F0ZMZ5_DICPU	Mitochondrial isovaleryl-CoA dehydrogenase. (411 aa)
	F0ZVU4_DICPU	Uncharacterized protein. (417 aa)
	F0ZLJ3_DICPU	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family. (689 aa)

Your Current Organism:

Dictyostelium purpureum

NCBI taxonomy Id: 5786
Other names: D. purpureum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
F0Z7G3_DICPU	F0ZHV1_DICPU	F0Z7G3	F0ZHV1	Uncharacterized protein.	Uncharacterized protein.	0.914
F0Z7G3_DICPU	F0ZLJ3_DICPU	F0Z7G3	F0ZLJ3	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.401
F0Z7G3_DICPU	F0ZVU4_DICPU	F0Z7G3	F0ZVU4	Uncharacterized protein.	Uncharacterized protein.	0.943
F0ZHD4_DICPU	F0ZHV1_DICPU	F0ZHD4	F0ZHV1	Uncharacterized protein.	Uncharacterized protein.	0.909
F0ZHD4_DICPU	F0ZLJ3_DICPU	F0ZHD4	F0ZLJ3	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.663
F0ZHV1_DICPU	F0Z7G3_DICPU	F0ZHV1	F0Z7G3	Uncharacterized protein.	Uncharacterized protein.	0.914
F0ZHV1_DICPU	F0ZHD4_DICPU	F0ZHV1	F0ZHD4	Uncharacterized protein.	Uncharacterized protein.	0.909
F0ZHV1_DICPU	F0ZLJ3_DICPU	F0ZHV1	F0ZLJ3	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.915
F0ZLJ3_DICPU	F0Z7G3_DICPU	F0ZLJ3	F0Z7G3	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Uncharacterized protein.	0.401
F0ZLJ3_DICPU	F0ZHD4_DICPU	F0ZLJ3	F0ZHD4	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Uncharacterized protein.	0.663
F0ZLJ3_DICPU	F0ZHV1_DICPU	F0ZLJ3	F0ZHV1	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Uncharacterized protein.	0.915
F0ZLJ3_DICPU	F0ZVU4_DICPU	F0ZLJ3	F0ZVU4	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Uncharacterized protein.	0.567
F0ZVU4_DICPU	F0Z7G3_DICPU	F0ZVU4	F0Z7G3	Uncharacterized protein.	Uncharacterized protein.	0.943
F0ZVU4_DICPU	F0ZLJ3_DICPU	F0ZVU4	F0ZLJ3	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.567