STRINGSTRING
hmd hmd mer mer mtd mtd ACX72488.1 ACX72488.1 ACX72489.1 ACX72489.1 ACX72490.1 ACX72490.1 ACX72558.1 ACX72558.1 ACX73135.1 ACX73135.1 ACX73136.1 ACX73136.1 ACX73137.1 ACX73137.1 ACX73138.1 ACX73138.1 mch mch
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
hmdCoenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin reductase; Catalyzes the reversible reduction of methenyl-H(4)MPT(+) to methylene-H(4)MPT. (358 aa)
mer5,10-methylenetetrahydromethanopterin reductase; Catalyzes the reversible reduction of methylene-H(4)MPT to methyl-H(4)MPT; Belongs to the mer family. (331 aa)
mtdMethylenetetrahydromethanopterin dehydrogenase; Catalyzes the reversible reduction of methenyl-H(4)MPT(+) to methylene-H(4)MPT. (277 aa)
ACX72488.1KEGG: mja:MJ0727 coenzyme F420-reducing hydrogenase, alpha subunit. (298 aa)
ACX72489.1PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mja:MJ0726 coenzyme F420-reducing hydrogenase, gamma subunit. (216 aa)
ACX72490.1PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; KEGG: mja:MJ0725 coenzyme F420-reducing hydrogenase subunit beta. (271 aa)
ACX72558.1TIGRFAM: coenzyme F420-reducing hydrogenase delta subunit; hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: mfe:Mefer_0104 coenzyme F420-reducing hydrogenase delta subunit. (158 aa)
ACX73135.1Contains selenocysteine; TIGRFAM: coenzyme F420 hydrogenase, subunit alpha; PFAM: nickel-dependent hydrogenase large subunit; KEGG: mja:MJ0029 coenzyme F420-reducing hydrogenase, alpha subunit, selenocysteine-containing; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family. (410 aa)
ACX73136.1TIGRFAM: coenzyme F420-reducing hydrogenase delta subunit; hydrogenase maturation protease; PFAM: peptidase M52 hydrogen uptake protein; KEGG: mja:MJ0030 coenzyme F420-reducing hydrogenase, delta subunit (FrcD). (176 aa)
ACX73137.1TIGRFAM: coenzyme F420 hydrogenase, subunit gamma; PFAM: NADH ubiquinone oxidoreductase 20 kDa subunit; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: mja:MJ0031 coenzyme F420-reducing hydrogenase, gamma subunit. (227 aa)
ACX73138.1TIGRFAM: coenzyme F420 hydrogenase, subunit beta; PFAM: coenzyme F420 hydrogenase/dehydrogenase beta subunit domain protein; KEGG: mja:MJ0032 coenzyme F420-reducing hydrogenase subunit beta. (282 aa)
mchMethenyltetrahydromethanopterin cyclohydrolase; Catalyzes the reversible interconversion of 5-formyl-H(4)MPT to methenyl-H(4)MPT(+); Belongs to the MCH family. (323 aa)
Your Current Organism:
Methanocaldococcus vulcanius
NCBI taxonomy Id: 579137
Other names: M. vulcanius M7, Methanocaldococcus vulcanius M7, Methanocaldococcus vulcanius str. M7, Methanocaldococcus vulcanius strain M7
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