STRINGSTRING
ACS83982.1 ACS83982.1 ACS83984.1 ACS83984.1 ACS83985.1 ACS83985.1 ACS83986.1 ACS83986.1 ACS83987.1 ACS83987.1 ACS83988.1 ACS83988.1 ACS83989.1 ACS83989.1 ACS83990.1 ACS83990.1 hldD hldD hldE hldE ACS84689.1 ACS84689.1 gmhA gmhA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACS83982.1PFAM: glycosyl transferase family 2; KEGG: yps:YPTB0051 lipopolysaccharide core biosynthesis glycosyl transferase. (263 aa)
ACS83984.1PFAM: glycosyl transferase group 1; KEGG: plu:plu4862 WalR protein. (374 aa)
ACS83985.1PFAM: glycosyl transferase family 9; KEGG: bma:BMA1910 heptosyltransferase family protein. (369 aa)
ACS83986.1PFAM: O-antigen polymerase; KEGG: hch:HCH_01051 O-antigen polymerase. (400 aa)
ACS83987.1PFAM: glycosyl transferase group 1; KEGG: eta:ETA_00760 glycosyl transferase, group 1. (372 aa)
ACS83988.1TIGRFAM: lipopolysaccharide heptosyltransferase III; PFAM: glycosyl transferase family 9; KEGG: dar:Daro_0152 lipopolysaccharide heptosyltransferase III, putative. (361 aa)
ACS83989.1TIGRFAM: lipopolysaccharide heptosyltransferase I; PFAM: glycosyl transferase family 9; KEGG: eca:ECA0163 ADP-heptose:LPS heptosyl transferase I. (322 aa)
ACS83990.1TIGRFAM: lipopolysaccharide heptosyltransferase II; PFAM: glycosyl transferase family 9; KEGG: eca:ECA0164 ADP-heptose:LPS heptosyltransferase II. (350 aa)
hldDADP-L-glycero-D-manno-heptose-6-epimerase; Catalyzes the interconversion between ADP-D-glycero-beta-D- manno-heptose and ADP-L-glycero-beta-D-manno-heptose via an epimerization at carbon 6 of the heptose; Belongs to the NAD(P)-dependent epimerase/dehydratase family. HldD subfamily. (310 aa)
hldErfaE bifunctional protein; Catalyzes the ADP transfer from ATP to D-glycero-beta-D- manno-heptose 1-phosphate, yielding ADP-D-glycero-beta-D-manno-heptose. In the N-terminal section; belongs to the carbohydrate kinase PfkB family. (475 aa)
ACS84689.1TIGRFAM: D,D-heptose 1,7-bisphosphate phosphatase; histidinol-phosphate phosphatase family protein; hydrolase, HAD-superfamily, subfamily IIIA; PFAM: Polynucleotide kinase 3 phosphatase central region; KEGG: eca:ECA3523 D,D-heptose 1,7-bisphosphate phosphatase. (188 aa)
gmhAPhosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate. (193 aa)
Your Current Organism:
Dickeya paradisiaca
NCBI taxonomy Id: 579405
Other names: D. paradisiaca Ech703, Dickeya dadantii Ech703, Dickeya paradisiaca Ech703
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