STRINGSTRING
ACS87060.1 ACS87060.1 ACS86947.1 ACS86947.1 ACS86946.1 ACS86946.1 ACS86911.1 ACS86911.1 ACS86844.1 ACS86844.1 ACS86801.1 ACS86801.1 ACS86800.1 ACS86800.1 ACS86796.1 ACS86796.1 mutH mutH recC recC recB recB recD recD mutS mutS ACS86665.1 ACS86665.1 ACS86663.1 ACS86663.1 lon lon ACS86646.1 ACS86646.1 ung ung recO recO psiE psiE sulA sulA ACS86392.1 ACS86392.1 ACS86334.1 ACS86334.1 ACS86237.1 ACS86237.1 uvrB uvrB recF recF ACS83838.1 ACS83838.1 ACS83873.1 ACS83873.1 ACS83877.1 ACS83877.1 ACS83891.1 ACS83891.1 ACS83902.1 ACS83902.1 ACS83951.1 ACS83951.1 mutM mutM ACS84059.1 ACS84059.1 ACS84143.1 ACS84143.1 ACS84144.1 ACS84144.1 ACS84164.1 ACS84164.1 ACS84266.1 ACS84266.1 ACS84275.1 ACS84275.1 mutL mutL ACS84369.1 ACS84369.1 apaG apaG ACS84439.1 ACS84439.1 ACS84470.1 ACS84470.1 ACS84534.1 ACS84534.1 uvrA uvrA ACS84602.1 ACS84602.1 ACS84629.1 ACS84629.1 msrA msrA ligA ligA dinB dinB ACS84765.1 ACS84765.1 ACS84766.1 ACS84766.1 ACS84767.1 ACS84767.1 recA recA ACS84812.1 ACS84812.1 ACS84819.1 ACS84819.1 recR recR ACS84893.1 ACS84893.1 ACS84938.1 ACS84938.1 ACS84940.1 ACS84940.1 ACS85012.1 ACS85012.1 ACS85206.1 ACS85206.1 uvrC uvrC ACS85363.1 ACS85363.1 ACS85375.1 ACS85375.1 mfd mfd ACS85447.1 ACS85447.1 ACS85505.1 ACS85505.1 ACS85517.1 ACS85517.1 ACS85571.1 ACS85571.1 ACS85644.1 ACS85644.1 ACS85656.1 ACS85656.1 ACS85658.1 ACS85658.1 nth nth ACS85754.1 ACS85754.1 ACS85772.1 ACS85772.1 ruvB ruvB ruvA ruvA ruvC ruvC ACS85971.1 ACS85971.1 ACS85998.1 ACS85998.1 ACS86047.1 ACS86047.1 ACS86104.1 ACS86104.1 nfo nfo ACS86150.1 ACS86150.1 polA polA recG recG ligB ligB ACS87668.1 ACS87668.1 nfi nfi ACS87403.1 ACS87403.1 ACS87402.1 ACS87402.1 ACS87370.1 ACS87370.1 ACS87310.1 ACS87310.1 ACS87307.1 ACS87307.1 ACS87258.1 ACS87258.1 radA radA lexA lexA ACS87152.1 ACS87152.1 deaD deaD ACS86981.1 ACS86981.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ACS87060.1TIGRFAM: single-stranded-DNA-specific exonuclease RecJ; PFAM: phosphoesterase RecJ domain protein; phosphoesterase DHHA1; KEGG: eca:ECA0772 ssDNA exonuclease RecJ. (580 aa)
ACS86947.1KEGG: eca:ECA0907 putative DNA-3-methyladenine glycosylase; PFAM: HhH-GPD family protein; SMART: HhH-GPD family protein. (225 aa)
ACS86946.1PFAM: 2OG-Fe(II) oxygenase; KEGG: eca:ECA0909 alkylated DNA repair protein. (217 aa)
ACS86911.1KEGG: aha:AHA_3054 hypothetical protein. (275 aa)
ACS86844.1ATPase; KEGG: hch:HCH_04105 ATPase. (388 aa)
ACS86801.1Fe(II) trafficking protein YggX; Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes; Belongs to the Fe(2+)-trafficking protein family. (90 aa)
ACS86800.1A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs. (363 aa)
ACS86796.1PFAM: aldo/keto reductase; KEGG: eca:ECA0981 putative aldo-keto reductase. (346 aa)
mutHDNA mismatch repair endonuclease mutH; Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair. Belongs to the MutH family. (228 aa)
recCExodeoxyribonuclease V, gamma subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and r [...] (1128 aa)
recBExodeoxyribonuclease V, beta subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and re [...] (1189 aa)
recDExodeoxyribonuclease V, alpha subunit; A helicase/nuclease that prepares dsDNA breaks (DSB) for recombinational DNA repair. Binds to DSBs and unwinds DNA via a highly rapid and processive ATP-dependent bidirectional helicase activity. Unwinds dsDNA until it encounters a Chi (crossover hotspot instigator) sequence from the 3' direction. Cuts ssDNA a few nucleotides 3' to the Chi site. The properties and activities of the enzyme are changed at Chi. The Chi-altered holoenzyme produces a long 3'-ssDNA overhang and facilitates RecA-binding to the ssDNA for homologous DNA recombination and r [...] (616 aa)
mutSDNA mismatch repair protein MutS; This protein is involved in the repair of mismatches in DNA. It is possible that it carries out the mismatch recognition step. This protein has a weak ATPase activity. (854 aa)
ACS86665.1TIGRFAM: DJ-1 family protein; PFAM: ThiJ/PfpI domain protein; KEGG: eca:ECA1135 hypothetical protein. (196 aa)
ACS86663.1PFAM: protein of unknown function DUF520; KEGG: eca:ECA1137 nucleotide-binding protein; Belongs to the UPF0234 family. (163 aa)
lonATP-dependent protease La; ATP-dependent serine protease that mediates the selective degradation of mutant and abnormal proteins as well as certain short- lived regulatory proteins. Required for cellular homeostasis and for survival from DNA damage and developmental changes induced by stress. Degrades polypeptides processively to yield small peptide fragments that are 5 to 10 amino acids long. Binds to DNA in a double-stranded, site-specific manner. (786 aa)
ACS86646.1TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; KEGG: eca:ECA1153 hypothetical protein. (122 aa)
unguracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (228 aa)
recODNA repair protein RecO; Involved in DNA repair and RecF pathway recombination. (244 aa)
psiEPFAM: phosphate-starvation-inducible E; KEGG: eca:ECA3195 phosphate-starvation-inducible protein PsiE. (135 aa)
sulACell division inhibitor SulA; Component of the SOS system and an inhibitor of cell division. Accumulation of SulA causes rapid cessation of cell division and the appearance of long, non-septate filaments. In the presence of GTP, binds a polymerization-competent form of FtsZ in a 1:1 ratio, thus inhibiting FtsZ polymerization and therefore preventing it from participating in the assembly of the Z ring. This mechanism prevents the premature segregation of damaged DNA to daughter cells during cell division. (164 aa)
ACS86392.1KEGG: rpa:RPA1432 putative nitroimidazole resistance protein. (152 aa)
ACS86334.1PFAM: YfbU family protein; KEGG: eca:ECA3037 hypothetical protein; Belongs to the UPF0304 family. (164 aa)
ACS86237.1PFAM: nitroreductase; KEGG: eca:ECA2838 hypothetical protein. (199 aa)
uvrBExcinuclease ABC, B subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (670 aa)
recFDNA replication and repair protein RecF; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family. (361 aa)
ACS83838.1methylated-DNA/protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. Belongs to the MGMT family. (360 aa)
ACS83873.1KEGG: mmw:Mmwyl1_3852 abortive infection protein. (407 aa)
ACS83877.1KEGG: eca:ECA0082 DNA-3-methyladenine glycosylase I; TIGRFAM: DNA-3-methyladenine glycosylase I; PFAM: methyladenine glycosylase. (212 aa)
ACS83891.1Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. (208 aa)
ACS83902.1PFAM: ThiJ/PfpI domain protein; KEGG: eca:ECA0102 hypothetical protein. (195 aa)
ACS83951.1KEGG: kpe:KPK_4062 hypothetical protein. (156 aa)
mutMformamidopyrimidine-DNA glycosylase; Involved in base excision repair of DNA damaged by oxidation or by mutagenic agents. Acts as DNA glycosylase that recognizes and removes damaged bases. Has a preference for oxidized purines, such as 7,8-dihydro-8-oxoguanine (8-oxoG). Has AP (apurinic/apyrimidinic) lyase activity and introduces nicks in the DNA strand. Cleaves the DNA backbone by beta-delta elimination to generate a single-strand break at the site of the removed base with both 3'- and 5'-phosphates. (269 aa)
ACS84059.1KEGG: eca:ECA4172 ATP-dependent DNA helicase RecQ; TIGRFAM: ATP-dependent DNA helicase RecQ; ATP-dependent DNA helicase, RecQ family; PFAM: DEAD/DEAH box helicase domain protein; HRDC domain protein; helicase domain protein; SMART: DEAD-like helicase; helicase domain protein; HRDC domain protein. (607 aa)
ACS84143.1PFAM: RNA-binding S4 domain protein; SMART: RNA-binding S4 domain protein; KEGG: eca:ECA4104 heat shock protein; Belongs to the HSP15 family. (137 aa)
ACS84144.1TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 3; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: eca:ECA4103 putative hydrolase. (225 aa)
ACS84164.1PFAM: ThiJ/PfpI domain protein; KEGG: eca:ECA3563 hypothetical protein. (225 aa)
ACS84266.1KEGG: eba:ebA5917 hypothetical protein. (452 aa)
ACS84275.1KEGG: spe:Spro_0410 hypothetical protein. (114 aa)
mutLDNA mismatch repair protein MutL; This protein is involved in the repair of mismatches in DNA. It is required for dam-dependent methyl-directed DNA mismatch repair. May act as a 'molecular matchmaker', a protein that promotes the formation of a stable complex between two or more DNA-binding proteins in an ATP-dependent manner without itself being part of a final effector complex. (629 aa)
ACS84369.1PFAM: protein of unknown function DUF541; KEGG: eca:ECA3908 hypothetical protein. (242 aa)
apaGPFAM: ApaG domain protein; KEGG: eca:ECA3860 ApaG. (125 aa)
ACS84439.1PFAM: FAD-binding 9 siderophore-interacting domain protein; Siderophore-interacting protein; KEGG: cko:CKO_00978 hypothetical protein. (299 aa)
ACS84470.1TIGRFAM: mutator MutT protein; PFAM: NUDIX hydrolase; KEGG: eca:ECA3805 nucleoside triphosphate pyrophosphohydrolase. (134 aa)
ACS84534.1Single-strand binding protein; Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism. (180 aa)
uvrAExcinuclease ABC, A subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. (943 aa)
ACS84602.1PFAM: protein of unknown function DUF1471; KEGG: eca:ECA3619 putative lipoprotein. (109 aa)
ACS84629.1PFAM: protein of unknown function DUF1107; KEGG: eca:ECA3599 hypothetical protein. (68 aa)
msrAPeptide methionine sulfoxide reductase; Has an important function as a repair enzyme for proteins that have been inactivated by oxidation. Catalyzes the reversible oxidation-reduction of methionine sulfoxide in proteins to methionine. (212 aa)
ligADNA ligase, NAD-dependent; DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily. (684 aa)
dinBDNA-directed DNA polymerase; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. (352 aa)
ACS84765.1PFAM: carbon starvation protein CstA; KEGG: eum:ECUMN_4963 conserved hypothetical protein; putative inner membrane protein. (716 aa)
ACS84766.1PFAM: protein of unknown function DUF466; KEGG: spe:Spro_0581 hypothetical protein. (67 aa)
ACS84767.1PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: eca:ECA1189 putative GTP-binding protein YjiA. (320 aa)
recArecA protein; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. (363 aa)
ACS84812.1TIGRFAM: methylated-DNA/protein-cysteine methyltransferase; PFAM: Methylated-DNA-[protein]-cysteine S-methyltransferase DNA binding; KEGG: yps:YPTB0977 putative 6-O-methylguanine DNA methyltransferase family protein. (105 aa)
ACS84819.1KEGG: eca:ECA1172 hypothetical protein. (54 aa)
recRRecombination protein RecR; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO. (201 aa)
ACS84893.1PFAM: protein of unknown function DUF493; KEGG: eca:ECA1299 hypothetical protein; Belongs to the UPF0250 family. (87 aa)
ACS84938.1PFAM: Protein of unknown function DUF1722; protein of unknown function DUF523; KEGG: eca:ECA1348 hypothetical protein. (317 aa)
ACS84940.1PFAM: protein of unknown function DUF34; KEGG: eca:ECA1350 putative hydrolase-oxidase. (247 aa)
ACS85012.1PFAM: protein of unknown function DUF535; KEGG: eta:ETA_30810 putative virulence protein. (331 aa)
ACS85206.1PFAM: Desulfoferrodoxin ferrous iron-binding region; KEGG: dat:HRM2_42000 Dfx. (187 aa)
uvrCExcinuclease ABC, C subunit; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. (610 aa)
ACS85363.1PFAM: peptidase S16 lon domain protein; KEGG: eca:ECA1749 hypothetical protein. (575 aa)
ACS85375.1PFAM: DinI family protein; KEGG: esa:ESA_02287 hypothetical protein. (80 aa)
mfdTranscription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. (1147 aa)
ACS85447.1PFAM: ABC transporter related; SMC domain protein; SMART: AAA ATPase; KEGG: eca:ECA2534 ABC transporter ATPase component. (637 aa)
ACS85505.1PFAM: carbon starvation protein CstA; KEGG: spe:Spro_2639 carbon starvation protein CstA. (690 aa)
ACS85517.1PFAM: cobalamin synthesis protein P47K; cobalamin synthesis CobW domain protein; KEGG: spe:Spro_2626 cobalamin synthesis protein P47K. (396 aa)
ACS85571.1PFAM: NUDIX hydrolase; KEGG: sit:TM1040_0128 NUDIX hydrolase; Belongs to the Nudix hydrolase family. (166 aa)
ACS85644.1KEGG: eca:ECA2185 hypothetical protein. (89 aa)
ACS85656.1PFAM: UspA domain protein; KEGG: eca:ECA2206 universal stress protein UspE. (319 aa)
ACS85658.1methylated-DNA/protein-cysteine methyltransferase; Involved in the cellular defense against the biological effects of O6-methylguanine (O6-MeG) and O4-methylthymine (O4-MeT) in DNA. Repairs the methylated nucleobase in DNA by stoichiometrically transferring the methyl group to a cysteine residue in the enzyme. This is a suicide reaction: the enzyme is irreversibly inactivated. (179 aa)
nthEndonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate. (211 aa)
ACS85754.1TIGRFAM: exodeoxyribonuclease III; exodeoxyribonuclease III Xth; PFAM: Endonuclease/exonuclease/phosphatase; KEGG: ypi:YpsIP31758_1976 exonuclease III. (268 aa)
ACS85772.1PFAM: SpoVR family protein; KEGG: eca:ECA2359 hypothetical protein. (511 aa)
ruvBHolliday junction DNA helicase RuvB; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. (334 aa)
ruvAHolliday junction DNA helicase RuvA; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. RuvA stimulates, in the presence of DNA, the weak ATPase activity of RuvB. (204 aa)
ruvCCrossover junction endodeoxyribonuclease RuvC; Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group. (173 aa)
ACS85971.1PFAM: cytoplasmic chaperone TorD family protein; KEGG: eca:ECA2528 hypothetical protein. (189 aa)
ACS85998.1PFAM: Exonuclease domain protein; Exonuclease RNase T and DNA polymerase III; KEGG: eca:ECA2565 exonuclease I. (476 aa)
ACS86047.1TIGRFAM: thioredoxin reductase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: eca:ECA2649 thioredoxin reductase. (319 aa)
ACS86104.1TIGRFAM: FkbH like protein; HAD-superfamily phosphatase, subfamily IIIC; KEGG: bha:BH1845 hypothetical protein. (582 aa)
nfoApurinic endonuclease Apn1; Endonuclease IV plays a role in DNA repair. It cleaves phosphodiester bonds at apurinic or apyrimidinic sites (AP sites) to produce new 5'-ends that are base-free deoxyribose 5-phosphate residues. It preferentially attacks modified AP sites created by bleomycin and neocarzinostatin. (288 aa)
ACS86150.1KEGG: eca:ECA1671 hypothetical protein. (66 aa)
polADNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. (931 aa)
recGATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily. (693 aa)
ligBDNA ligase (NAD(+)); Catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double-stranded DNA using NAD as a coenzyme and as the energy source for the reaction. Belongs to the NAD-dependent DNA ligase family. LigB subfamily. (575 aa)
ACS87668.1PFAM: protein of unknown function DUF1375; KEGG: eca:ECA4404 hypothetical protein. (123 aa)
nfiDeoxyribonuclease V; DNA repair enzyme involved in the repair of deaminated bases. Selectively cleaves double-stranded DNA at the second phosphodiester bond 3' to a deoxyinosine leaving behind the intact lesion on the nicked DNA. (224 aa)
ACS87403.1KEGG: yen:YE3748 putative anti-sigma B factor antagonist. (100 aa)
ACS87402.1PFAM: BolA family protein; KEGG: spe:Spro_4355 BolA family protein; Belongs to the BolA/IbaG family. (84 aa)
ACS87370.1PFAM: NAD(P)H dehydrogenase (quinone); KEGG: eca:ECA0337 putative modulator of drug activity B. (193 aa)
ACS87310.1KEGG: mgm:Mmc1_0112 hypothetical protein. (416 aa)
ACS87307.1KEGG: ypp:YPDSF_2605 prophage protein. (179 aa)
ACS87258.1PFAM: SMC domain protein; KEGG: plu:plu3302 hypothetical protein. (363 aa)
radADNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. (461 aa)
lexASOS-response transcriptional repressor, LexA; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. Binds to the 16 bp palindromic sequence 5'-CTGTATATATATACAG-3'. In the presence of single- stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. (203 aa)
ACS87152.1PFAM: protein of unknown function DUF883 ElaB; KEGG: eca:ECA0639 hypothetical protein. (101 aa)
deaDDEAD/DEAH box helicase domain protein; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation. (621 aa)
ACS86981.1DNA repair protein RecN; May be involved in recombinational repair of damaged DNA. (553 aa)
Your Current Organism:
Dickeya paradisiaca
NCBI taxonomy Id: 579405
Other names: D. paradisiaca Ech703, Dickeya dadantii Ech703, Dickeya paradisiaca Ech703
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