STRINGSTRING
Tlie_0961 Tlie_0961 Tlie_0962 Tlie_0962 atpE atpE Tlie_0964 Tlie_0964 Tlie_0965 Tlie_0965 atpA-2 atpA-2 atpB-2 atpB-2 atpD atpD atpB-3 atpB-3 atpA-3 atpA-3 Tlie_1493 Tlie_1493 Tlie_1494 Tlie_1494 Tlie_1495 Tlie_1495 Tlie_1496 Tlie_1496 Tlie_1497 Tlie_1497 atpD-2 atpD-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tlie_0961PFAM: V-type ATPase 116kDa subunit family; COGs: COG1269 H+-ATPase subunit I; InterPro IPR002490; KEGG: aco:Amico_0802 V-type ATPase 116 kDa subunit; PFAM: V-type ATPase 116 kDa subunit; SPTR: V-type ATPase 116 kDa subunit; Belongs to the V-ATPase 116 kDa subunit family. (671 aa)
Tlie_0962H+transporting two-sector ATPase C subunit; PFAM: ATP synthase subunit C; InterPro IPR002379; KEGG: aco:Amico_0803 H+transporting two-sector ATPase C subunit; PFAM: H+transporting two-sector ATPase C subunit; SPTR: H+transporting two-sector ATPase C subunit. (158 aa)
atpEH+transporting two-sector ATPase E subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (193 aa)
Tlie_0964PFAM: ATP synthase (C/AC39) subunit; COGs: COG1527 H+-ATPase subunit C; InterPro IPR002843; KEGG: aco:Amico_0805 H+transporting two-sector ATPase C (AC39) subunit; PFAM: H+transporting two-sector ATPase C (AC39) subunit; SPTR: H+transporting two-sector ATPase C (AC39) subunit. (337 aa)
Tlie_0965PFAM: ATP synthase (F/14-kDa) subunit; InterPro IPR008218; KEGG: aco:Amico_0806 vacuolar H+transporting two-sector ATPase F subunit; PFAM: Vacuolar H+transporting two-sector ATPase F subunit; SPTR: Vacuolar H+transporting two-sector ATPase F subunit. (113 aa)
atpA-2H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (599 aa)
atpB-2H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. (473 aa)
atpDV-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (208 aa)
atpB-3H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. (458 aa)
atpA-3Sodium-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (593 aa)
Tlie_1493H+transporting two-sector ATPase E subunit; PFAM: ATP synthase (E/31 kDa) subunit; InterPro IPR000533: IPR002842; KEGG: tai:Taci_0518 hypothetical protein; PFAM: H+transporting two-sector ATPase E subunit; SPTR: Putative uncharacterized protein. (206 aa)
Tlie_1494PFAM: ATP synthase (F/14-kDa) subunit; InterPro IPR008218; KEGG: tai:Taci_0519 vacuolar H+transporting two-sector ATPase F subunit; PFAM: Vacuolar H+transporting two-sector ATPase F subunit; SPTR: ATP synthase subunit. (99 aa)
Tlie_1495H+transporting two-sector ATPase C subunit; PFAM: ATP synthase subunit C; InterPro IPR000454: IPR002379; KEGG: tai:Taci_0520 H+transporting two-sector ATPase C subunit; PFAM: H+transporting two-sector ATPase C subunit; SPTR: H+transporting two-sector ATPase C subunit. (137 aa)
Tlie_1496PFAM: V-type ATPase 116kDa subunit family; COGs: COG1269 H+-ATPase subunit I; InterPro IPR002490; KEGG: tai:Taci_0521 V-type ATPase 116 kDa subunit; PFAM: V-type ATPase 116 kDa subunit; SPTR: Putative V-type sodium ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family. (637 aa)
Tlie_1497PFAM: ATP synthase (C/AC39) subunit; COGs: COG1527 H+-ATPase subunit C; InterPro IPR002843; KEGG: tai:Taci_0522 H+transporting two-sector ATPase C (AC39) subunit; PFAM: H+transporting two-sector ATPase C (AC39) subunit; SPTR: ATP synthase subunit. (363 aa)
atpD-2V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (208 aa)
Your Current Organism:
Thermovirga lienii
NCBI taxonomy Id: 580340
Other names: T. lienii DSM 17291, Thermovirga lienii DSM 17291, Thermovirga lienii str. DSM 17291, Thermovirga lienii strain DSM 17291
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