STRINGSTRING
Tlie_0950 Tlie_0950 Tlie_1199 Tlie_1199 Tlie_1247 Tlie_1247 Tlie_1248 Tlie_1248 Tlie_1249 Tlie_1249 Tlie_1464 Tlie_1464 Tlie_1465 Tlie_1465 Tlie_1467 Tlie_1467 Tlie_1524 Tlie_1524 Tlie_1618 Tlie_1618
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
protein homology
Your Input:
Tlie_0950InterPro IPR006058; KEGG: tai:Taci_0972 sarcosine oxidase, alpha subunit; SPTR: Sarcosine oxidase, subunit alpha. (105 aa)
Tlie_1199PFAM: 4Fe-4S binding domain; TIGRFAM: electron transport complex, RnfABCDGE type, B subunit; COGs: COG1143 Formate hydrogenlyase subunit 6/NADH:ubiquinone oxidoreductase 23 kD subunit (chain I); InterPro IPR017900: IPR017896; KEGG: aco:Amico_1262 4Fe-4S ferredoxin iron-sulfur binding domain protein; SPTR: 4Fe-4S ferredoxin iron-sulfur binding domain protein. (213 aa)
Tlie_1247PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023; KEGG: dtu:Dtur_0916 NADH dehydrogenase (ubiquinone) 24 kDa subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; SPTR: NADH dehydrogenase (Ubiquinone) 24 kDa subunit. (165 aa)
Tlie_1248Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; 4Fe-4S binding domain; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR017900: IPR011538: IPR019554: IPR019575: IPR 017896; KEGG: tko:TK1613 NADH:ubiquinone oxidoreductase, NADH-binding subunit F; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Soluble ligand binding domain; NADH ubiquinone oxidoreductase, F subunit, iron sulphur binding; SPT [...] (588 aa)
Tlie_1249PFAM: Pyridine nucleotide-disulphide oxidoreductase; Molybdopterin oxidoreductase; 4Fe-4S binding domain; Molybdopterin oxidoreductase Fe4S4 domain; COGs: COG3383 Uncharacterized anaerobic dehydrogenase; InterProIPR000759: IPR017900: IPR006126: IPR001041: IPR 013027: IPR006963: IPR006656: IPR017896; KEGG: slo:Shew_0809 formate dehydrogenase, alpha subunit; PFAM: molybdopterin oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; ferredoxin; molybdopterin oxidoreductase Fe4S4 region; SPTR: Molybdopterin oxidoreductase. (1241 aa)
Tlie_1464NADH:ubiquinone oxidoreductase, subunit G, iron-sulfur binding protein; PFAM: 2Fe-2S iron-sulfur cluster binding domain; Molybdopterin oxidoreductase; NADH-ubiquinone oxidoreductase-G iron-sulfur binding region; Molybdopterin oxidoreductase Fe4S4 domain; COGs: COG1034 NADH dehydrogenase/NADH:ubiquinone oxidoreductase 75 kD subunit (chain G); InterProIPR017900: IPR001041: IPR019574: IPR006963: IPR 006656: IPR017896; KEGG: dtu:Dtur_0076 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; PFAM: NADH:ubiquinone oxidoreductase, subunit G, iron-sulphur binding; ferredoxin; molybdopterin [...] (568 aa)
Tlie_1465Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; PFAM: Pyridine nucleotide-disulphide oxidoreductase; NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR013027: IPR000103: IPR001949: IPR011538: IPR 019554: IPR019575; KEGG: dal:Dalk_2559 respiratory-chain NADH dehydrogenase domain 51 kDa subunit; PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Solub [...] (1046 aa)
Tlie_1467PFAM: Respiratory-chain NADH dehydrogenase 24 Kd subunit; COGs: COG1905 NADH:ubiquinone oxidoreductase 24 kD subunit; InterPro IPR002023; KEGG: chy:CHY_0731 Fe-hydrogenase, gamma subunit; PFAM: NADH dehydrogenase (ubiquinone) 24 kDa subunit; SPTR: NADH dehydrogenase I, E subunit. (161 aa)
Tlie_1524Hypothetical protein; PFAM: Dienelactone hydrolase family; KEGG: aco:Amico_0263 hypothetical protein; SPTR: Putative uncharacterized protein. (265 aa)
Tlie_1618NADH dehydrogenase (quinone); PFAM: NADH-ubiquinone oxidoreductase-F iron-sulfur binding region; 4Fe-4S binding domain; Respiratory-chain NADH dehydrogenase 24 Kd subunit; Respiratory-chain NADH dehydrogenase 51 Kd subunit; SLBB domain; COGs: COG1894 NADH:ubiquinone oxidoreductase NADH-binding (51 kD) subunit; InterProIPR017896: IPR009737: IPR011538: IPR019554: IPR 019575: IPR017900: IPR001949; KEGG: aco:Amico_1556 NADH dehydrogenase (quinone); PFAM: Respiratory-chain NADH dehydrogenase domain 51 kDa subunit; Sucraseferredoxin family protein; Soluble ligand binding domain; NADH ubiquin [...] (597 aa)
Your Current Organism:
Thermovirga lienii
NCBI taxonomy Id: 580340
Other names: T. lienii DSM 17291, Thermovirga lienii DSM 17291, Thermovirga lienii str. DSM 17291, Thermovirga lienii strain DSM 17291
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