STRINGSTRING
Tlie_0456 Tlie_0456 Tlie_0731 Tlie_0731 Tlie_0732 Tlie_0732 Tlie_0735 Tlie_0735 Tlie_0736 Tlie_0736 Tlie_0737 Tlie_0737 mutS2 mutS2 Tlie_0739 Tlie_0739 Tlie_0740 Tlie_0740 Tlie_1429 Tlie_1429 Tlie_1430 Tlie_1430
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tlie_0456Transporter, CPA2 family (TC 2.A.37); PFAM: TrkA-N domain; Sodium/hydrogen exchanger family; TrkA-C domain; COGs: COG0475 Kef-type K+ transport systems membrane components; InterPro IPR006153: IPR006037; KEGG: sth:STH2841 Na+/H+ antiporter; PFAM: sodium/hydrogen exchanger; TrkA-C domain protein; SPTR: Na+/H+ antiporter. (631 aa)
Tlie_0731H(+)-transporting two-sector ATPase; PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family; COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445; KEGG: aco:Amico_0707 H(+)-transporting two-sector ATPase; PFAM: cation transporter; PRIAM: H(+)-transporting two-sector ATPase; SPTR: H(+)-transporting two-sector ATPase; manually curated. (441 aa)
Tlie_0732PFAM: TrkA-N domain; TrkA-C domain; COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR003148: IPR006037; KEGG: aco:Amico_0708 TrkA-N domain protein; PFAM: TrkA-N domain protein; TrkA-C domain protein; SPTR: TrkA-N domain protein. (221 aa)
Tlie_0735Hypothetical protein; KEGG: pfa:PF11_0207 conserved Plasmodium protein; SPTR: Putative uncharacterized protein. (92 aa)
Tlie_0736KEGG: aco:Amico_0712 hypothetical protein; SPTR: Putative uncharacterized protein. (78 aa)
Tlie_0737PFAM: Colicin V production protein; COGs: COG1286 membrane protein required for colicin V production; InterPro IPR003825; KEGG: aco:Amico_0713 colicin V production protein; PFAM: Colicin V production protein; SPTR: Colicin V production protein. (200 aa)
mutS2MutS2 family protein; Endonuclease that is involved in the suppression of homologous recombination and may therefore have a key role in the control of bacterial genetic diversity; Belongs to the DNA mismatch repair MutS family. MutS2 subfamily. (782 aa)
Tlie_0739Hypothetical protein; PFAM: Asp/Glu/Hydantoin racemase; KEGG: ara:Arad_7064 hypothetical protein; SPTR: Putative uncharacterized protein. (246 aa)
Tlie_0740PFAM: 'Cold-shock' DNA-binding domain; COGs: COG1278 Cold shock protein; InterPro IPR012156: IPR019844: IPR002059: IPR011129; KEGG: aco:Amico_0349 cold-shock DNA-binding domain protein; PFAM: Cold-shock protein DNA-binding; SMART: Cold shock protein; SPTR: Cold-shock DNA-binding domain protein. (67 aa)
Tlie_1429PFAM: Cation transport protein; TIGRFAM: potassium uptake protein, TrkH family; COGs: COG0168 Trk-type K+ transport systems membrane components; InterPro IPR003445: IPR004772; KEGG: aco:Amico_1288 potassium uptake protein, TrkH family; PFAM: cation transporter; SPTR: Potassium uptake protein, TrkH family; TIGRFAM: potassium uptake protein, TrkH family. (483 aa)
Tlie_1430PFAM: TrkA-N domain; TrkA-C domain; COGs: COG0569 K+ transport systems NAD-binding component; InterPro IPR006036: IPR001917: IPR003148: IPR006037; KEGG: aco:Amico_1287 TrkA-N domain protein; PFAM: TrkA-N domain protein; TrkA-C domain protein; SPTR: TrkA-N domain protein. (457 aa)
Your Current Organism:
Thermovirga lienii
NCBI taxonomy Id: 580340
Other names: T. lienii DSM 17291, Thermovirga lienii DSM 17291, Thermovirga lienii str. DSM 17291, Thermovirga lienii strain DSM 17291
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