STRINGSTRING
Tlie_0914 Tlie_0914 Tlie_0077 Tlie_0077 Tlie_0908 Tlie_0908 Tlie_0909 Tlie_0909 atpA atpA atpB atpB Tlie_0962 Tlie_0962 atpE atpE atpA-2 atpA-2 atpB-2 atpB-2 atpD atpD atpB-3 atpB-3 atpA-3 atpA-3 Tlie_1493 Tlie_1493 Tlie_1495 Tlie_1495 atpD-2 atpD-2
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tlie_0914PFAM: ATP synthase subunit D; COGs: COG1394 H+-ATPase subunit D; InterPro IPR002699; KEGG: aco:Amico_0984 H+transporting two-sector ATPase D subunit; PFAM: H+transporting two-sector ATPase D subunit; SPTR: H+transporting two-sector ATPase D subunit; TIGRFAM: V-type ATPase, D subunit. (214 aa)
Tlie_0077Type III secretion system ATPase, FliI/YscN; PFAM: ATP synthase alpha/beta family, nucleotide-binding domain; TIGRFAM: ATPase FliI/YscN family; flagellar protein export ATPase FliI; COGs: COG1157 Flagellar biosynthesis/type III secretory pathway ATPase; InterProIPR003593: IPR005714: IPR020003: IPR004100: IPR 000194; KEGG: tai:Taci_1334 ATPase, FliI/YscN family; PFAM: H+transporting two-sector ATPase alpha/beta subunit central region; H+transporting two-sector ATPase alpha/beta subunit domain protein; SMART: AAA ATPase; SPTR: ATPase, FliI/YscN family; TIGRFAM: ATPase, FliI/YscN family. (447 aa)
Tlie_0908H+transporting two-sector ATPase C subunit; PFAM: ATP synthase subunit C; InterPro IPR002379; KEGG: aco:Amico_0990 H+transporting two-sector ATPase C subunit; PFAM: H+transporting two-sector ATPase C subunit; SPTR: H+transporting two-sector ATPase C subunit. (72 aa)
Tlie_0909Hypothetical protein; PFAM: ATP synthase (E/31 kDa) subunit; KEGG: aco:Amico_0989 hypothetical protein; SPTR: H+transporting two-sector ATPase E subunit. (212 aa)
atpAH+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (587 aa)
atpBH+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. (464 aa)
Tlie_0962H+transporting two-sector ATPase C subunit; PFAM: ATP synthase subunit C; InterPro IPR002379; KEGG: aco:Amico_0803 H+transporting two-sector ATPase C subunit; PFAM: H+transporting two-sector ATPase C subunit; SPTR: H+transporting two-sector ATPase C subunit. (158 aa)
atpEH+transporting two-sector ATPase E subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (193 aa)
atpA-2H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (599 aa)
atpB-2H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. (473 aa)
atpDV-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (208 aa)
atpB-3H+transporting two-sector ATPase alpha/beta subunit central region; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. (458 aa)
atpA-3Sodium-transporting two-sector ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (593 aa)
Tlie_1493H+transporting two-sector ATPase E subunit; PFAM: ATP synthase (E/31 kDa) subunit; InterPro IPR000533: IPR002842; KEGG: tai:Taci_0518 hypothetical protein; PFAM: H+transporting two-sector ATPase E subunit; SPTR: Putative uncharacterized protein. (206 aa)
Tlie_1495H+transporting two-sector ATPase C subunit; PFAM: ATP synthase subunit C; InterPro IPR000454: IPR002379; KEGG: tai:Taci_0520 H+transporting two-sector ATPase C subunit; PFAM: H+transporting two-sector ATPase C subunit; SPTR: H+transporting two-sector ATPase C subunit. (137 aa)
atpD-2V-type ATPase, D subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. (208 aa)
Your Current Organism:
Thermovirga lienii
NCBI taxonomy Id: 580340
Other names: T. lienii DSM 17291, Thermovirga lienii DSM 17291, Thermovirga lienii str. DSM 17291, Thermovirga lienii strain DSM 17291
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