STRINGSTRING
Tlie_1860 Tlie_1860 Tlie_1859 Tlie_1859 ilvD ilvD Tlie_0059 Tlie_0059 Tlie_0060 Tlie_0060 leuD leuD leuC leuC Tlie_0144 Tlie_0144 cobD cobD Tlie_1881 Tlie_1881 panD panD Tlie_0196 Tlie_0196 Tlie_0197 Tlie_0197 Tlie_1871 Tlie_1871 Tlie_0198 Tlie_0198 Tlie_0222 Tlie_0222 aroD aroD Tlie_0277 Tlie_0277 Tlie_0293 Tlie_0293 hutU hutU Tlie_0375 Tlie_0375 Tlie_0385 Tlie_0385 psd psd Tlie_0397 Tlie_0397 Tlie_0398 Tlie_0398 Tlie_0399 Tlie_0399 Tlie_0407 Tlie_0407 Tlie_0410 Tlie_0410 deoC deoC Tlie_0423 Tlie_0423 Tlie_0455 Tlie_0455 argH argH fabZ fabZ Tlie_0589 Tlie_0589 eno eno dacA dacA Tlie_0773 Tlie_0773 Tlie_0792 Tlie_0792 Tlie_0826 Tlie_0826 hisF hisF hisH hisH hisB hisB Tlie_0891 Tlie_0891 nnrD nnrD Tlie_0988 Tlie_0988 moaC moaC mltG mltG hutH hutH speH speH Tlie_1046 Tlie_1046 Tlie_1072 Tlie_1072 Tlie_1078 Tlie_1078 pyrF pyrF Tlie_1122 Tlie_1122 Tlie_1156 Tlie_1156 Tlie_1231 Tlie_1231 Tlie_1850 Tlie_1850 Tlie_1845 Tlie_1845 Tlie_1842 Tlie_1842 trpB-2 trpB-2 trpA trpA Tlie_1837 Tlie_1837 leuC-3 leuC-3 leuD-4 leuD-4 pdxS pdxS pdxT pdxT Tlie_1734 Tlie_1734 Tlie_1681 Tlie_1681 Tlie_1680 Tlie_1680 Tlie_1677 Tlie_1677 trpB trpB Tlie_1580 Tlie_1580 Tlie_1569 Tlie_1569 Tlie_1568 Tlie_1568 leuD-3 leuD-3 leuC-2 leuC-2 leuD-2 leuD-2 Tlie_1562 Tlie_1562 Tlie_1479 Tlie_1479 Tlie_1397 Tlie_1397 speH-2 speH-2 Tlie_1382 Tlie_1382 Tlie_1330 Tlie_1330 Tlie_1310 Tlie_1310 Tlie_1308 Tlie_1308
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tlie_1860PFAM: Protein of unknown function DUF111; TIGRFAM: TIGR00299 family protein; COGs: COG1641 conserved hypothetical protein; InterPro IPR002822; KEGG: tmt:Tmath_0780 protein of unknown function DUF111; PFAM: protein of unknown function DUF111; SPTR: Putative uncharacterized protein; Belongs to the LarC family. (387 aa)
Tlie_1859Malic protein NAD-binding protein; PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain; COGs: COG0281 Malic enzyme; InterPro IPR012301: IPR012302: IPR005829: IPR015884; KEGG: aco:Amico_1790 malate dehydrogenase (oxaloacetate-decarboxylating); PFAM: malic protein NAD-binding; malic protein domain protein; SPTR: Malate dehydrogenase (Oxaloacetate-decarboxylating). (398 aa)
ilvDPFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; InterPro IPR004404: IPR010916: IPR020558: IPR000581; KEGG: tjr:TherJR_0359 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; PRIAM: Dihydroxy-acid dehydratase; SPTR: Dihydroxy-acid dehydratase; TIGRFAM: dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. (553 aa)
Tlie_0059PFAM: Serine dehydratase alpha chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit; COGs: COG1760 L-serine deaminase; InterPro IPR004642: IPR005130; KEGG: aco:Amico_0078 L-serine dehydratase, iron-sulfur-dependent, alpha subunit; PFAM: serine dehydratase alpha chain; PRIAM: L-serine ammonia-lyase; SPTR: L-serine dehydratase, iron-sulfur-dependent, alpha subunit; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, alpha subunit. (292 aa)
Tlie_0060PFAM: ACT domain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit; COGs: COG1760 L-serine deaminase; InterPro IPR004643: IPR005131: IPR002912; KEGG: tai:Taci_0266 L-serine dehydratase, iron-sulfur-dependent, beta subunit; PFAM: serine dehydratase beta chain; amino acid-binding ACT domain protein; PRIAM: L-serine ammonia-lyase; SPTR: L-serine dehydratase, iron-sulfur-dependent, beta subunit; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit. (220 aa)
leuD3-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily. (171 aa)
leuC3-isopropylmalate dehydratase, large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (432 aa)
Tlie_0144PFAM: Dehydratase family; TIGRFAM: dihydroxy-acid dehydratase; COGs: COG0129 Dihydroxyacid dehydratase/phosphogluconate dehydratase; InterPro IPR000581; KEGG: nth:Nther_1850 dihydroxy-acid dehydratase; PFAM: dihydroxy-acid and 6-phosphogluconate dehydratase; PRIAM: Dihydroxy-acid dehydratase; SPTR: Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family. (560 aa)
cobDCobalamin biosynthesis protein CobD; Converts cobyric acid to cobinamide by the addition of aminopropanol on the F carboxylic group. (308 aa)
Tlie_1881L-threonine ammonia-lyase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine dehydratase, medium form; COGs: COG1171 Threonine dehydratase; InterPro IPR001926; KEGG: tai:Taci_1720 pyridoxal-5'-phosphate-dependent protein beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Threonine ammonia-lyase. (323 aa)
panDL-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. (117 aa)
Tlie_0196PFAM: Dehydratase large subunit; COGs: COG4909 Propanediol dehydratase large subunit; InterPro IPR003206; KEGG: tex:Teth514_1953 glycerol dehydratase; PFAM: dehydratase large subunit; PRIAM: Glycerol dehydratase; SPTR: Glycerol dehydratase. (557 aa)
Tlie_0197PFAM: Dehydratase medium subunit; InterPro IPR003208; KEGG: dal:Dalk_4998 dehydratase medium subunit; PFAM: dehydratase medium subunit; SPTR: Glycerol dehydratase, medium subunit. (222 aa)
Tlie_1871PFAM: Phosphoenolpyruvate carboxykinase; COGs: COG1866 Phosphoenolpyruvate carboxykinase (ATP); InterPro IPR001272; KEGG: cpo:COPRO5265_0282 phosphoenolpyruvate carboxykinase; PFAM: phosphoenolpyruvate carboxykinase (ATP); SPTR: Phosphoenolpyruvate carboxykinase; Belongs to the phosphoenolpyruvate carboxykinase (ATP) family. (502 aa)
Tlie_0198PFAM: Dehydratase small subunit; COGs: COG4910 Propanediol dehydratase small subunit; InterPro IPR003207; KEGG: tjr:TherJR_0620 dehydratase small subunit; PFAM: dehydratase small subunit; SPTR: Propanediol utilization: dehydratase, small subunit. (176 aa)
Tlie_0222PFAM: Isocitrate lyase family; COGs: COG2513 PEP phosphonomutase; InterPro IPR018523: IPR000918; KEGG: aco:Amico_1317 mutase family protein; PFAM: isocitrate lyase and phosphorylmutase; SPTR: Mutase family protein. (305 aa)
aroD3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. (255 aa)
Tlie_0277PFAM: Protein of unknown function (DUF1445); COGs: COG4336 conserved hypothetical protein; InterPro IPR009906: IPR016938; KEGG: aco:Amico_0499 protein of unknown function DUF1445; PFAM: protein of unknown function DUF1445; SPTR: Putative uncharacterized protein; Belongs to the D-glutamate cyclase family. (267 aa)
Tlie_0293PFAM: HpcH/HpaI aldolase/citrate lyase family; COGs: COG3836 2 4-dihydroxyhept-2-ene-1 7-dioic acid aldolase; InterPro IPR005000; KEGG: aco:Amico_1892 4-hydroxy-2-oxovalerate aldolase; PFAM: HpcH/HpaI aldolase; PRIAM: 4-hydroxy-2-oxovalerate aldolase; SPTR: 4-hydroxy-2-oxovalerate aldolase; Belongs to the HpcH/HpaI aldolase family. (254 aa)
hutUUrocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate. (678 aa)
Tlie_0375PFAM: Enoyl-CoA hydratase/isomerase family; COGs: COG1024 Enoyl-CoA hydratase/carnithine racemase; InterPro IPR001753; KEGG: ank:AnaeK_2009 enoyl-CoA hydratase/isomerase; PFAM: Enoyl-CoA hydratase/isomerase; SPTR: Enoyl-CoA hydratase/isomerase. (262 aa)
Tlie_0385Protein of unknown function UPF0047; PFAM: Uncharacterised protein family UPF0047; TIGRFAM: secondary thiamine-phosphate synthase enzyme; COGs: COG0432 conserved hypothetical protein; InterPro IPR001602; KEGG: cth:Cthe_0103 hypothetical protein; PFAM: protein of unknown function UPF0047; SPTR: Putative uncharacterized protein. (133 aa)
psdPhosphatidylserine decarboxylase related protein; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). (210 aa)
Tlie_0397Pyridoxal-5'-phosphate-dependent protein beta subunit; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase; COGs: COG0498 Threonine synthase; InterPro IPR001926: IPR000634; KEGG: aco:Amico_0072 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Threonine synthase. (360 aa)
Tlie_0398PFAM: Fumarate hydratase (Fumerase); TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, alpha region; COGs: COG1951 Tartrate dehydratase alpha subunit/Fumarate hydratase class I N-terminal domain; InterPro IPR004646; KEGG: chy:CHY_0061 fumarate hydratase; PFAM: Fe-S type hydro-lyase tartrate/fumarate alpha region; PRIAM: Fumarate hydratase; SPTR: Fumarate hydratase, alpha subunit; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit. (284 aa)
Tlie_0399PFAM: Fumarase C-terminus; TIGRFAM: hydro-lyases, Fe-S type, tartrate/fumarate subfamily, beta region; COGs: COG1838 Tartrate dehydratase beta subunit/Fumarate hydratase class I C-terminal domain; InterPro IPR004647; KEGG: tpd:Teth39_2170 tartrate/fumarate subfamily Fe-S type hydro-lyase beta subunit; PFAM: Fe-S type hydro-lyase tartrate/fumarate beta region; SPTR: Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit; TIGRFAM: hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit. (187 aa)
Tlie_0407PFAM: subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; COGs: COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; InterPro IPR005661; KEGG: aco:Amico_0883 sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; PRIAM: Glutaconyl-CoA decarboxylase; SPTR: Sodium ion-translocating decarboxylase, beta subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit. (374 aa)
Tlie_0410Hypothetical protein; PFAM: Serine dehydratase alpha chain; COGs: COG3681 conserved hypothetical protein; InterPro IPR021144; KEGG: dvm:DvMF_1488 protein of unknown function DUF1063; SPTR: UPF0597 protein DvMF_1488; Belongs to the UPF0597 family. (426 aa)
deoCDeoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. (245 aa)
Tlie_0423L-threonine aldolase; PFAM: Beta-eliminating lyase; COGs: COG2008 Threonine aldolase; InterPro IPR001597; KEGG: aco:Amico_0290 threonine aldolase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; PRIAM: Threonine aldolase; SPTR: Threonine aldolase. (344 aa)
Tlie_0455PFAM: Amidohydrolase; COGs: COG2159 metal-dependent hydrolase of the TIM-barrel fold; InterPro IPR006992; KEGG: aco:Amico_0320 amidohydrolase 2; PFAM: amidohydrolase 2; SPTR: Amidohydrolase 2. (288 aa)
argHPFAM: Lyase; TIGRFAM: argininosuccinate lyase; COGs: COG0165 Argininosuccinate lyase; InterPro IPR000362: IPR009049: IPR020557: IPR003031; KEGG: aco:Amico_1512 argininosuccinate lyase; PFAM: fumarate lyase; PRIAM: Argininosuccinate lyase; SPTR: Argininosuccinate lyase; TIGRFAM: argininosuccinate lyase. (469 aa)
fabZ3-hydroxyacyl-(acyl-carrier-protein) dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. (146 aa)
Tlie_0589L-threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. (347 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (440 aa)
dacAProtein of unknown function DUF147; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. (285 aa)
Tlie_0773PFAM: HMGL-like; Conserved carboxylase domain; COGs: COG5016 Pyruvate/oxaloacetate carboxyltransferase; InterPro IPR000891: IPR003379; KEGG: aco:Amico_0751 conserved carboxylase region; PFAM: Conserved carboxylase region; pyruvate carboxyltransferase; SPTR: Conserved carboxylase region. (498 aa)
Tlie_0792Conserved hypothetical protein CHP02757; PFAM: Protein of unknown function (DUF2400); TIGRFAM: TIGR02757 family protein; InterPro IPR014127; KEGG: aco:Amico_0403 hypothetical protein; PFAM: Conserved hypothetical protein CHP02757; SPTR: Putative uncharacterized protein. (277 aa)
Tlie_0826Citrate lyase ligase; Acetylation of prosthetic group (2-(5''-phosphoribosyl)-3'- dephosphocoenzyme-A) of the gamma subunit of citrate lyase. (353 aa)
hisFImidazole glycerol phosphate synthase subunit hisF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisF subunit catalyzes the cyclization activity that produces IGP and AICAR from PRFAR using the ammonia provided by the HisH subunit. (263 aa)
hisHImidazole glycerol phosphate synthase, glutamine amidotransferase subunit; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the synthesis of IGP and AICAR. The resulting ammonia molecule is channeled to the active site of HisF. (203 aa)
hisBPFAM: Imidazoleglycerol-phosphate dehydratase; COGs: COG0131 Imidazoleglycerol-phosphate dehydratase; InterPro IPR000807: IPR020565; KEGG: aco:Amico_0681 imidazoleglycerol-phosphate dehydratase; PFAM: imidazoleglycerol-phosphate dehydratase; PRIAM: Imidazoleglycerol-phosphate dehydratase; SPTR: Imidazoleglycerol-phosphate dehydratase. (189 aa)
Tlie_0891PFAM: Acetoacetate decarboxylase (ADC); COGs: COG4689 Acetoacetate decarboxylase; InterPro IPR010451; KEGG: rxy:Rxyl_1034 acetoacetate decarboxylase; PFAM: Acetoacetate decarboxylase; SPTR: Acetoacetate decarboxylase. (273 aa)
nnrDCarbohydrate kinase, YjeF related protein; Bifunctional enzyme that catalyzes the epimerization of the S- and R-forms of NAD(P)HX and the dehydration of the S-form of NAD(P)HX at the expense of ADP, which is converted to AMP. This allows the repair of both epimers of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow t [...] (521 aa)
Tlie_0988Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate. (324 aa)
moaCGTP cyclohydrolase subunit MoaC; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family. (163 aa)
mltGAminodeoxychorismate lyase; Functions as a peptidoglycan terminase that cleaves nascent peptidoglycan strands endolytically to terminate their elongation. Belongs to the transglycosylase MltG family. (348 aa)
hutHPFAM: Phenylalanine and histidine ammonia-lyase; TIGRFAM: phenylalanine ammonia-lyase; histidine ammonia-lyase; COGs: COG2986 Histidine ammonia-lyase; InterPro IPR001106: IPR005921; KEGG: tai:Taci_0916 histidine ammonia-lyase; PFAM: phenylalanine/histidine ammonia-lyase; PRIAM: Histidine ammonia-lyase; SPTR: Histidine ammonia-lyase; TIGRFAM: histidine ammonia-lyase. (509 aa)
speHS-adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. (140 aa)
Tlie_1046PFAM: Pyruvoyl-dependent arginine decarboxylase (PvlArgDC); TIGRFAM: arginine decarboxylase, pyruvoyl-dependent; COGs: COG1945 conserved hypothetical protein; InterPro IPR000209: IPR002724; KEGG: hmo:HM1_1757 pyruvoyl-dependent arginine decarboxylase; PFAM: Pyruvoyl-dependent arginine decarboxylase; PRIAM: Arginine decarboxylase; SPTR: Arginine decarboxylase, pyruvoyl-dependent; TIGRFAM: arginine decarboxylase, pyruvoyl-dependent. (156 aa)
Tlie_1072PFAM: HhH-GPD superfamily base excision DNA repair protein; COGs: COG0177 EndoIII-related endonuclease; InterPro IPR004035: IPR003265: IPR003651; KEGG: aco:Amico_1041 DNA-(apurinic or apyrimidinic site) lyase; PFAM: HhH-GPD family protein; iron-sulfur cluster loop; SMART: HhH-GPD family protein; iron-sulfur cluster loop; SPTR: DNA-(Apurinic or apyrimidinic site) lyase. (244 aa)
Tlie_1078PFAM: Lyase; Adenylosuccinate lyase C-terminus; TIGRFAM: adenylosuccinate lyase; COGs: COG0015 Adenylosuccinate lyase; InterProIPR020557: IPR000362: IPR003031: IPR004769: IPR 019468; KEGG: aco:Amico_1048 adenylosuccinate lyase; PFAM: fumarate lyase; Adenylosuccinate lyase-like; SPTR: Adenylosuccinate lyase; TIGRFAM: adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily. (436 aa)
pyrFOrotidine 5'-phosphate decarboxylase; Catalyzes the decarboxylation of orotidine 5'-monophosphate (OMP) to uridine 5'-monophosphate (UMP); Belongs to the OMP decarboxylase family. Type 1 subfamily. (234 aa)
Tlie_1122Phosphopantothenoylcysteine decarboxylase/phosphopantothenate/cysteine ligase; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (408 aa)
Tlie_1156Pyridoxal-5'-phosphate-dependent protein beta subunit; PFAM: Pyridoxal-phosphate dependent enzyme; COGs: COG1171 Threonine dehydratase; InterPro IPR001926; KEGG: tai:Taci_1720 pyridoxal-5'-phosphate-dependent protein beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Threonine ammonia-lyase. (327 aa)
Tlie_1231Malic protein NAD-binding protein; PFAM: Malic enzyme, NAD binding domain; Malic enzyme, N-terminal domain; COGs: COG0281 Malic enzyme; InterPro IPR012301: IPR012302; KEGG: tai:Taci_0810 malate dehydrogenase (oxaloacetate-decarboxylating); PFAM: malic protein NAD-binding; malic protein domain protein; SPTR: Malate dehydrogenase (Oxaloacetate-decarboxylating). (414 aa)
Tlie_1850Hydroxymethylpyrimidine synthase; PFAM: ThiC family; TIGRFAM: thiamine biosynthesis protein ThiC; COGs: COG0422 Thiamine biosynthesis protein ThiC; InterPro IPR002817; KEGG: sfu:Sfum_2776 thiamine biosynthesis protein ThiC; PFAM: thiamine biosynthesis protein ThiC; SPTR: Thiamine biosynthesis protein ThiC; TIGRFAM: thiamine biosynthesis protein ThiC. (425 aa)
Tlie_1845Anthranilate synthase; PFAM: chorismate binding enzyme; Anthranilate synthase component I, N terminal region; COGs: COG0147 Anthranilate/para-aminobenzoate synthase component I; InterPro IPR006805: IPR015890: IPR019999; KEGG: pmx:PERMA_0276 anthranilate synthase component I; PFAM: Chorismate binding-like; Anthranilate synthase component I domain protein; PRIAM: Anthranilate synthase; SPTR: Anthranilate synthase. (507 aa)
Tlie_1842PFAM: Indole-3-glycerol phosphate synthase; COGs: COG0134 Indole-3-glycerol phosphate synthase; InterPro IPR013798: IPR001468; KEGG: pmo:Pmob_1210 indole-3-glycerol-phosphate synthase; PFAM: Indole-3-glycerol phosphate synthase; PRIAM: Indole-3-glycerol-phosphate synthase; SPTR: Indole-3-glycerol phosphate synthase; Belongs to the TrpC family. (250 aa)
trpB-2Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (396 aa)
trpATryptophan synthase, alpha chain; The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. (266 aa)
Tlie_1837PFAM: Isocitrate lyase family; TIGRFAM: carboxyvinyl-carboxyphosphonate phosphorylmutase; COGs: COG2513 PEP phosphonomutase; InterPro IPR000918: IPR018523; KEGG: aco:Amico_1318 carboxyvinyl-carboxyphosphonatephosphorylmutase; PFAM: isocitrate lyase and phosphorylmutase; SPTR: Methylisocitrate lyase. (292 aa)
leuC-3Homoaconitate hydratase family protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (420 aa)
leuD-43-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily. (169 aa)
pdxSPyridoxal phosphate synthase yaaD subunit; Catalyzes the formation of pyridoxal 5'-phosphate from ribose 5-phosphate (RBP), glyceraldehyde 3-phosphate (G3P) and ammonia. The ammonia is provided by the PdxT subunit. Can also use ribulose 5- phosphate and dihydroxyacetone phosphate as substrates, resulting from enzyme-catalyzed isomerization of RBP and G3P, respectively. Belongs to the PdxS/SNZ family. (291 aa)
pdxTPyridoxal phosphate synthase yaaE subunit; Catalyzes the hydrolysis of glutamine to glutamate and ammonia as part of the biosynthesis of pyridoxal 5'-phosphate. The resulting ammonia molecule is channeled to the active site of PdxS. (189 aa)
Tlie_1734L-threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. (415 aa)
Tlie_1681PFAM: Citrate lyase, alpha subunit (CitF); TIGRFAM: citrate lyase, alpha subunit; COGs: COG3051 Citrate lyase alpha subunit; InterPro IPR006472; KEGG: tai:Taci_0024 citrate lyase, alpha subunit; PFAM: Citrate lyase alpha subunit; PRIAM: Citrate CoA-transferase; SPTR: Citrate lyase, alpha subunit; TIGRFAM: citrate lyase, alpha subunit. (523 aa)
Tlie_1680Citryl-CoA lyase; PFAM: HpcH/HpaI aldolase/citrate lyase family; COGs: COG2301 Citrate lyase beta subunit; InterPro IPR005000: IPR011206; KEGG: tai:Taci_0340 citrate (pro-3S)-lyase; PFAM: HpcH/HpaI aldolase; PRIAM: Citryl-CoA lyase; SPTR: Citrate (Pro-3S)-lyase; Belongs to the HpcH/HpaI aldolase family. (306 aa)
Tlie_1677Aconitate hydratase; PFAM: Aconitase C-terminal domain; Aconitase family (aconitate hydratase); TIGRFAM: aconitate hydratase, putative, Aquifex type; COGs: COG1048 Aconitase A; InterPro IPR006250: IPR001030: IPR000573: IPR018136; KEGG: tai:Taci_0020 aconitate hydratase; PFAM: aconitate hydratase domain-containing protein; SPTR: Putative aconitate hydratase; TIGRFAM: aconitate hydratase. (644 aa)
trpBTryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (400 aa)
Tlie_1580PFAM: Serine dehydratase alpha chain; Serine dehydratase beta chain; TIGRFAM: L-serine dehydratase, iron-sulfur-dependent, beta subunit; COGs: COG1760 L-serine deaminase; InterPro IPR005131: IPR005130; KEGG: tai:Taci_1548 serine dehydratase alpha chain; PFAM: serine dehydratase alpha chain; serine dehydratase beta chain; SPTR: Serine dehydratase alpha chain. (518 aa)
Tlie_1569PFAM: Citrate lyase, alpha subunit (CitF); TIGRFAM: citrate lyase, alpha subunit; COGs: COG3051 Citrate lyase alpha subunit; InterPro IPR006472; KEGG: tai:Taci_1371 citrate lyase, alpha subunit; PFAM: Citrate lyase alpha subunit; PRIAM: Citrate CoA-transferase; SPTR: Citrate lyase, alpha subunit; TIGRFAM: citrate lyase, alpha subunit. (517 aa)
Tlie_1568Citryl-CoA lyase; PFAM: HpcH/HpaI aldolase/citrate lyase family; TIGRFAM: citrate lyase, beta subunit; COGs: COG2301 Citrate lyase beta subunit; InterPro IPR005000: IPR011206; KEGG: tai:Taci_1370 citrate (pro-3S)-lyase; PFAM: HpcH/HpaI aldolase; PRIAM: Citryl-CoA lyase; SPTR: Citrate (Pro-3S)-lyase; Belongs to the HpcH/HpaI aldolase family. (292 aa)
leuD-33-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily. (164 aa)
leuC-2Homoaconitate hydratase family protein; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (418 aa)
leuD-23-isopropylmalate dehydratase, small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily. (172 aa)
Tlie_1562PFAM: Aconitase family (aconitate hydratase); TIGRFAM: 3-isopropylmalate dehydratase, large subunit; homoaconitate hydratase family protein; COGs: COG0065 3-isopropylmalate dehydratase large subunit; InterPro IPR011826: IPR006251: IPR001030; KEGG: tai:Taci_1364 homoaconitate hydratase family protein; PFAM: aconitate hydratase domain-containing protein; SPTR: Homoaconitate hydratase family protein; TIGRFAM: homoaconitate hydratase family protein; 3-isopropylmalate dehydratase. (426 aa)
Tlie_1479PFAM: subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit; COGs: COG1883 Na+-transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; InterPro IPR005661; KEGG: tai:Taci_0241 sodium ion-translocating decarboxylase, beta subunit; PFAM: Na+transporting methylmalonyl-CoA/oxaloacetate decarboxylase beta subunit; PRIAM: Oxaloacetate decarboxylase; SPTR: Sodium ion-translocating decarboxylase, beta subunit; TIGRFAM: sodium ion-translocating decarboxylase, beta subunit. (373 aa)
Tlie_1397L-fuculose 1-phosphate aldolase; PFAM: Class II Aldolase and Adducin N-terminal domain; TIGRFAM: L-ribulose-5-phosphate 4-epimerase; COGs: COG0235 Ribulose-5-phosphate 4-epimerase and related epimerase and aldolase; InterPro IPR000169: IPR001303; KEGG: pca:Pcar_3030 L-fuculose-1-phosphate aldolase; PFAM: class II aldolase/adducin family protein; SPTR: L-fuculose-1-phosphate aldolase. (215 aa)
speH-2Adenosylmethionine decarboxylase proenzyme; Catalyzes the decarboxylation of S-adenosylmethionine to S- adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine; Belongs to the prokaryotic AdoMetDC family. Type 1 subfamily. (136 aa)
Tlie_1382PFAM: Fructose-bisphosphate aldolase class-II; COGs: COG0191 Fructose/tagatose bisphosphate aldolase; InterPro IPR000771; KEGG: aco:Amico_0571 ketose-bisphosphate aldolase class-II; PFAM: ketose-bisphosphate aldolase class-II; SPTR: Ketose-bisphosphate aldolase family protein. (428 aa)
Tlie_1330Tryptophanase; PFAM: Beta-eliminating lyase; COGs: COG3033 Tryptophanase; InterPro IPR001597: IPR011166; KEGG: tai:Taci_0642 tryptophanase; PFAM: aromatic amino acid beta-eliminating lyase/threonine aldolase; PRIAM: Tryptophanase; SPTR: Tryptophanase. (463 aa)
Tlie_1310Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA). (305 aa)
Tlie_1308PFAM: 6-pyruvoyl tetrahydropterin synthase; TIGRFAM: queuosine biosynthesis protein QueD; 6-pyruvoyl tetrahydropterin synthase/QueD family protein; COGs: COG0720 6-pyruvoyl-tetrahydropterin synthase; InterPro IPR007115; KEGG: kol:Kole_1946 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; PFAM: 6-pyruvoyl tetrahydropterin synthase and hypothetical protein; SPTR: Putative 6-pyruvoyl tetrahydrobiopterin synthase. (123 aa)
Your Current Organism:
Thermovirga lienii
NCBI taxonomy Id: 580340
Other names: T. lienii DSM 17291, Thermovirga lienii DSM 17291, Thermovirga lienii str. DSM 17291, Thermovirga lienii strain DSM 17291
Server load: low (16%) [HD]