STRINGSTRING
Tlie_0965 Tlie_0965 Tlie_1494 Tlie_1494 Tlie_0911 Tlie_0911
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tlie_0965PFAM: ATP synthase (F/14-kDa) subunit; InterPro IPR008218; KEGG: aco:Amico_0806 vacuolar H+transporting two-sector ATPase F subunit; PFAM: Vacuolar H+transporting two-sector ATPase F subunit; SPTR: Vacuolar H+transporting two-sector ATPase F subunit. (113 aa)
Tlie_1494PFAM: ATP synthase (F/14-kDa) subunit; InterPro IPR008218; KEGG: tai:Taci_0519 vacuolar H+transporting two-sector ATPase F subunit; PFAM: Vacuolar H+transporting two-sector ATPase F subunit; SPTR: ATP synthase subunit. (99 aa)
Tlie_0911KEGG: aco:Amico_0987 hypothetical protein; SPTR: Putative uncharacterized protein. (90 aa)
Your Current Organism:
Thermovirga lienii
NCBI taxonomy Id: 580340
Other names: T. lienii DSM 17291, Thermovirga lienii DSM 17291, Thermovirga lienii str. DSM 17291, Thermovirga lienii strain DSM 17291
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