STRINGSTRING
Tlie_1732 Tlie_1732 Tlie_1881 Tlie_1881 trpB-2 trpB-2 Tlie_1734 Tlie_1734 Tlie_1698 Tlie_1698 Tlie_1696 Tlie_1696 Tlie_1671 Tlie_1671 trpB trpB Tlie_1156 Tlie_1156 Tlie_0589 Tlie_0589 Tlie_0397 Tlie_0397 Tlie_0367 Tlie_0367
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Tlie_1732Pyridoxal-5'-phosphate-dependent protein beta subunit; PFAM: Pyridoxal-phosphate dependent enzyme; COGs: COG0031 Cysteine synthase; InterPro IPR001926; KEGG: aco:Amico_0198 pyridoxal-5'-phosphate-dependent protein beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Pyridoxal-5'-phosphate-dependent protein beta subunit. (490 aa)
Tlie_1881L-threonine ammonia-lyase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine dehydratase, medium form; COGs: COG1171 Threonine dehydratase; InterPro IPR001926; KEGG: tai:Taci_1720 pyridoxal-5'-phosphate-dependent protein beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Threonine ammonia-lyase. (323 aa)
trpB-2Tryptophan synthase, beta chain; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (396 aa)
Tlie_1734L-threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. (415 aa)
Tlie_1698D-cysteine desulfhydrase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family; COGs: COG2515 1-aminocyclopropane-1-carboxylate deaminase; InterPro IPR005966: IPR001926; KEGG: ckr:CKR_0446 D-cysteine desulfhydrase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; PRIAM: 1-aminocyclopropane-1-carboxylate deaminase; SPTR: Putative uncharacterized protein; TIGRFAM: pyridoxal phosphate-dependent enzymes, D-cysteine desulfhydrase family. (345 aa)
Tlie_1696Pyridoxal-5'-phosphate-dependent protein beta subunit; PFAM: Pyridoxal-phosphate dependent enzyme; COGs: COG0031 Cysteine synthase; InterPro IPR001926; KEGG: hor:Hore_21100 cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: 2-amino-4-ketopentanoate thiolase beta subunit. (473 aa)
Tlie_1671Pyridoxal-5'-phosphate-dependent protein beta subunit; PFAM: Pyridoxal-phosphate dependent enzyme; COGs: COG0031 Cysteine synthase; InterPro IPR001926: IPR005479; KEGG: cdl:CDR20291_1562 cysteine synthase A; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Cysteine synthase A. (317 aa)
trpBTryptophan synthase, beta subunit; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. (400 aa)
Tlie_1156Pyridoxal-5'-phosphate-dependent protein beta subunit; PFAM: Pyridoxal-phosphate dependent enzyme; COGs: COG1171 Threonine dehydratase; InterPro IPR001926; KEGG: tai:Taci_1720 pyridoxal-5'-phosphate-dependent protein beta subunit; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Threonine ammonia-lyase. (327 aa)
Tlie_0589L-threonine synthase; Catalyzes the gamma-elimination of phosphate from L- phosphohomoserine and the beta-addition of water to produce L- threonine. (347 aa)
Tlie_0397Pyridoxal-5'-phosphate-dependent protein beta subunit; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: threonine synthase; COGs: COG0498 Threonine synthase; InterPro IPR001926: IPR000634; KEGG: aco:Amico_0072 threonine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Threonine synthase. (360 aa)
Tlie_0367Cysteine synthase; PFAM: Pyridoxal-phosphate dependent enzyme; TIGRFAM: cysteine synthase A; cysteine synthases; COGs: COG0031 Cysteine synthase; InterPro IPR001926: IPR005856: IPR005859: IPR000634; KEGG: aco:Amico_0096 cysteine synthase; PFAM: Pyridoxal-5'-phosphate-dependent protein beta subunit; SPTR: Cysteine synthase A; TIGRFAM: cysteine synthase; cysteine synthase A. (306 aa)
Your Current Organism:
Thermovirga lienii
NCBI taxonomy Id: 580340
Other names: T. lienii DSM 17291, Thermovirga lienii DSM 17291, Thermovirga lienii str. DSM 17291, Thermovirga lienii strain DSM 17291
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