STRINGSTRING
PBANKA_0106700 PBANKA_0106700 PBANKA_0108600 PBANKA_0108600 PBANKA_0401100 PBANKA_0401100 PBANKA_0213000 PBANKA_0213000 PBANKA_0407100 PBANKA_0407100 PBANKA_0409100 PBANKA_0409100 PBANKA_0502700 PBANKA_0502700 PBANKA_0306800 PBANKA_0306800 PBANKA_0712800 PBANKA_0712800 PBANKA_0408400 PBANKA_0408400 PBANKA_0514100 PBANKA_0514100 PBANKA_0523100 PBANKA_0523100 PBANKA_0522900 PBANKA_0522900 PBANKA_0805800 PBANKA_0805800 PBANKA_0315200 PBANKA_0315200 PBANKA_0823600 PBANKA_0823600 PBANKA_0406800 PBANKA_0406800 PBANKA_0620000 PBANKA_0620000 PBANKA_0825600 PBANKA_0825600 PBANKA_0708400 PBANKA_0708400 LSM8 LSM8 PBANKA_0709500 PBANKA_0709500 PBANKA_0813500 PBANKA_0813500 PBANKA_0717500 PBANKA_0717500 PBANKA_0517400 PBANKA_0517400 PBANKA_0922800 PBANKA_0922800 A0A509AIR2 A0A509AIR2 PBANKA_0928800 PBANKA_0928800 PBANKA_0721700 PBANKA_0721700 PBANKA_0802100 PBANKA_0802100 PBANKA_0517300 PBANKA_0517300 PBANKA_0835800 PBANKA_0835800 PBANKA_0824800 PBANKA_0824800 PBANKA_0811000 PBANKA_0811000 PBANKA_0108700 PBANKA_0108700 PBANKA_0910100 PBANKA_0910100 PBANKA_0915800 PBANKA_0915800 PBANKA_0921600 PBANKA_0921600 PBANKA_0621400 PBANKA_0621400 LSM1 LSM1 PBANKA_1027900 PBANKA_1027900 PBANKA_0707800 PBANKA_0707800 PBANKA_0937400 PBANKA_0937400 LSM3 LSM3 PBANKA_0315400 PBANKA_0315400 PBANKA_0717900 PBANKA_0717900 PBANKA_0401000 PBANKA_0401000 PBANKA_0933000 PBANKA_0933000 PBANKA_1114600 PBANKA_1114600 PBANKA_1119100 PBANKA_1119100 PBANKA_1132100 PBANKA_1132100 PBANKA_0910000 PBANKA_0910000 PBANKA_1140200 PBANKA_1140200 PBANKA_1104000 PBANKA_1104000 PBANKA_1108300 PBANKA_1108300 PBANKA_1213500 PBANKA_1213500 PBANKA_0921500 PBANKA_0921500 PBANKA_0607600 PBANKA_0607600 PBANKA_0917200 PBANKA_0917200 PBANKA_1122500 PBANKA_1122500 PBANKA_0613700 PBANKA_0613700 PBANKA_0936400 PBANKA_0936400 LSM4 LSM4 PBANKA_1222000 PBANKA_1222000 PBANKA_0622700 PBANKA_0622700 PBANKA_1003100 PBANKA_1003100 PBANKA_1232100 PBANKA_1232100 A0A509AMJ8 A0A509AMJ8 PBANKA_1145700 PBANKA_1145700 PBANKA_1235100 PBANKA_1235100 PBANKA_1301000 PBANKA_1301000 PBANKA_1001400 PBANKA_1001400 PBANKA_1136300 PBANKA_1136300 PBANKA_1020200 PBANKA_1020200 PBANKA_1245300 PBANKA_1245300 PBANKA_1023200 PBANKA_1023200 PBANKA_1202200 PBANKA_1202200 PBANKA_1204200 PBANKA_1204200 PBANKA_1214800 PBANKA_1214800 PBANKA_1318600 PBANKA_1318600 PBANKA_1230500 PBANKA_1230500 PBANKA_1225800 PBANKA_1225800 PBANKA_1229100 PBANKA_1229100 PBANKA_1039500 PBANKA_1039500 PBANKA_1335200 PBANKA_1335200 PBANKA_1340200 PBANKA_1340200 PBANKA_1233300 PBANKA_1233300 PBANKA_0831300 PBANKA_0831300 PBANKA_1237500 PBANKA_1237500 PBANKA_1319000 PBANKA_1319000 PBANKA_1301700 PBANKA_1301700 PBANKA_1307700 PBANKA_1307700 PBANKA_1314400 PBANKA_1314400 PBANKA_1143000 PBANKA_1143000 PBANKA_1309700 PBANKA_1309700 PBANKA_1316400 PBANKA_1316400 PBANKA_1331600 PBANKA_1331600 PBANKA_1140800 PBANKA_1140800 PBANKA_1332000 PBANKA_1332000 PBANKA_0931700 PBANKA_0931700 PBANKA_1202700 PBANKA_1202700 PBANKA_1342900 PBANKA_1342900 PBANKA_1006700 PBANKA_1006700 PBANKA_1356900 PBANKA_1356900 PBANKA_1435300 PBANKA_1435300 PBANKA_1441900 PBANKA_1441900 PBANKA_1361000 PBANKA_1361000 PBANKA_1339400 PBANKA_1339400 PBANKA_1363000 PBANKA_1363000 PBANKA_1365300 PBANKA_1365300 PBANKA_1415000 PBANKA_1415000 PBANKA_1405400 PBANKA_1405400 PBANKA_1409700 PBANKA_1409700 LSM5 LSM5 PBANKA_1425000 PBANKA_1425000 PBANKA_1033800 PBANKA_1033800 PBANKA_1461100 PBANKA_1461100 PBANKA_1103800 PBANKA_1103800 PBANKA_1439800 PBANKA_1439800 PBANKA_1325300 PBANKA_1325300 PBANKA_1407800 PBANKA_1407800 PBANKA_1315200 PBANKA_1315200 PBANKA_1109800 PBANKA_1109800 PBANKA_1320200 PBANKA_1320200 PBANKA_1339500 PBANKA_1339500 PBANKA_1341500 PBANKA_1341500 PBANKA_1456500 PBANKA_1456500 PBANKA_1119000 PBANKA_1119000 PBANKA_1446200 PBANKA_1446200 PBANKA_1449400 PBANKA_1449400 PBANKA_1345800 PBANKA_1345800 PBANKA_1424800 PBANKA_1424800 PBANKA_1341800 PBANKA_1341800 PBANKA_1405300 PBANKA_1405300 PBANKA_1406300 PBANKA_1406300 PBANKA_1411800 PBANKA_1411800 PBANKA_1450500 PBANKA_1450500 PBANKA_1452400 PBANKA_1452400 PBANKA_1216900 PBANKA_1216900 PBANKA_1413200 PBANKA_1413200 PBANKA_1419200 PBANKA_1419200 PBANKA_1435600 PBANKA_1435600 PBANKA_1243300 PBANKA_1243300 PBANKA_1452800 PBANKA_1452800 PBANKA_1459700 PBANKA_1459700 PBANKA_1462700 PBANKA_1462700 PBANKA_1332100 PBANKA_1332100 PBANKA_1337100 PBANKA_1337100 PBANKA_1415500 PBANKA_1415500 PBANKA_1446300 PBANKA_1446300
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PBANKA_0106700Uncharacterized protein. (1177 aa)
PBANKA_0108600Pre-mRNA-splicing factor SLU7, putative. (429 aa)
PBANKA_0401100Serine/threonine protein kinase, putative. (1306 aa)
PBANKA_0213000RNA-binding protein, putative. (526 aa)
PBANKA_0407100Splicing factor 3B subunit 1, putative. (1269 aa)
PBANKA_0409100Pre-mRNA splicing factor, putative. (422 aa)
PBANKA_0502700Pre-mRNA-splicing factor RDS3, putative. (111 aa)
PBANKA_0306800ATP-dependent RNA helicase UAP56, putative. (466 aa)
PBANKA_0712800U4/U6.U5 small nuclear ribonucleoprotein, putative. (361 aa)
PBANKA_0408400Phosphoglycerate mutase, putative. (1069 aa)
PBANKA_0514100Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP22, putative. (1162 aa)
PBANKA_0523100Eukaryotic initiation factor 4A-III, putative; Belongs to the DEAD box helicase family. (390 aa)
PBANKA_0522900Pre-mRNA-splicing helicase BRR2, putative. (2453 aa)
PBANKA_0805800RNA-binding protein, putative. (270 aa)
PBANKA_0315200Small nuclear ribonucleoprotein Sm D2. (101 aa)
PBANKA_0823600Pre-mRNA-splicing factor 18, putative. (342 aa)
PBANKA_0406800Pre-mRNA-processing factor 19, putative. (499 aa)
PBANKA_0620000Pre-mRNA-splicing factor CWC15, putative. (269 aa)
PBANKA_0825600Splicing factor 3A subunit 3, putative. (576 aa)
PBANKA_0708400Small nuclear ribonucleoprotein G. (83 aa)
LSM8U6 snRNA-associated Sm-like protein LSm8; Plays role in pre-mRNA splicing as component of the U4/U6-U5 tri-snRNP complex that is involved in spliceosome assembly, and as component of the precatalytic spliceosome (spliceosome B complex). The heptameric LSM2-8 complex binds specifically to the 3'-terminal U-tract of U6 snRNA. (95 aa)
PBANKA_0709500ATP-dependent RNA helicase DHX36, putative. (784 aa)
PBANKA_0813500SAP domain-containing protein, putative. (247 aa)
PBANKA_0717500Nuclear cap-binding protein subunit 2. (239 aa)
PBANKA_0517400Pre-mRNA-splicing factor CEF1, putative. (903 aa)
PBANKA_0922800Small nuclear ribonucleoprotein Sm D1; Essential for pre-mRNA splicing. Implicated in the formation of stable, biologically active snRNP structures. Belongs to the snRNP core protein family. (123 aa)
A0A509AIR2RNA-binding protein, putative. (1242 aa)
PBANKA_0928800Splicing factor U2AF small subunit, putative. (304 aa)
PBANKA_0721700Ran-specific GTPase-activating protein 1, putative. (266 aa)
PBANKA_0802100Phosphoinositide-binding protein, putative. (796 aa)
PBANKA_0517300WD repeat-containing protein 70, putative. (690 aa)
PBANKA_0835800U2 small nuclear ribonucleoprotein B'', putative. (192 aa)
PBANKA_0824800Polyadenylate-binding protein 2, putative. (199 aa)
PBANKA_0811000Small nuclear ribonucleoprotein Sm D3. (116 aa)
PBANKA_0108700RNA-binding protein 25, putative. (679 aa)
PBANKA_0910100Beta-catenin-like protein 1, putative. (522 aa)
PBANKA_0915800Pre-mRNA-splicing factor 38A, putative. (362 aa)
PBANKA_0921600RNA-binding protein, putative. (728 aa)
PBANKA_0621400RNA-binding protein, putative. (1132 aa)
LSM1U6 snRNA-associated Sm-like protein LSm1; Probably involved with other LSm subunits in the general process of degradation of mRNAs. (142 aa)
PBANKA_1027900Small nuclear ribonucleoprotein-associated protein B, putative. (194 aa)
PBANKA_0707800U5 small nuclear ribonucleoprotein 40 kDa protein, putative. (322 aa)
PBANKA_0937400Pre-mRNA-processing factor 6, putative. (1162 aa)
LSM3U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (91 aa)
PBANKA_0315400Pre-mRNA-processing protein 45, putative. (480 aa)
PBANKA_0717900RNA-binding protein, putative. (447 aa)
PBANKA_0401000Pre-mRNA-splicing factor PRP46, putative. (618 aa)
PBANKA_0933000Serine/threonine protein kinase, putative. (706 aa)
PBANKA_1114600Pre-mRNA-splicing factor CWC2, putative. (646 aa)
PBANKA_1119100Splicing factor 3A subunit 2, putative. (231 aa)
PBANKA_1132100Splicing factor subunit; Belongs to the SF3B5 family. (85 aa)
PBANKA_0910000Uncharacterized protein. (1730 aa)
PBANKA_1140200Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16, putative. (1150 aa)
PBANKA_1104000ATP-dependent helicase, putative; Belongs to the DEAD box helicase family. (707 aa)
PBANKA_1108300Pre-mRNA-processing ATP-dependent RNA helicase PRP5, putative. (1331 aa)
PBANKA_1213500CWC16 domain-containing protein, putative. (361 aa)
PBANKA_0921500Small nuclear ribonucleoprotein F, putative. (86 aa)
PBANKA_0607600U6 snRNA-associated Sm-like protein LSm7, putative. (108 aa)
PBANKA_0917200RNA-binding protein s1, putative. (144 aa)
PBANKA_1122500Uncharacterized protein. (610 aa)
PBANKA_0613700RNA-binding protein, putative. (924 aa)
PBANKA_0936400WW domain-containing protein. (553 aa)
LSM4U6 snRNA-associated Sm-like protein LSm4; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (132 aa)
PBANKA_1222000Histone deacetylase complex subunit SAP18, putative. (727 aa)
PBANKA_0622700Mago nashi protein homologue, putative. (148 aa)
PBANKA_1003100Pre-mRNA-processing-splicing factor 8, putative. (2949 aa)
PBANKA_1232100Serine/arginine-rich splicing factor 1, putative. (315 aa)
A0A509AMJ8RNA-binding protein, putative. (1279 aa)
PBANKA_1145700U2 small nuclear ribonucleoprotein A', putative. (175 aa)
PBANKA_1235100U6 snRNA-associated Sm-like protein LSm2; Binds specifically to the 3'-terminal U-tract of U6 snRNA. (104 aa)
PBANKA_1301000HA2 domain-containing protein. (938 aa)
PBANKA_1001400Pre-mRNA-splicing factor CLF1, putative. (683 aa)
PBANKA_1136300RNA-binding protein, putative. (180 aa)
PBANKA_1020200Peptidyl-prolyl cis-trans isomerase, putative. (425 aa)
PBANKA_1245300Formin 1, putative. (2536 aa)
PBANKA_1023200Splicing factor 3B subunit 4, putative. (424 aa)
PBANKA_1202200U5 small nuclear ribonucleoprotein component, putative. (1193 aa)
PBANKA_1204200IMP1-like protein, putative. (440 aa)
PBANKA_1214800U4/U6.U5 tri-snRNP-associated protein 1, putative. (643 aa)
PBANKA_1318600Uncharacterized protein. (153 aa)
PBANKA_1230500RNA and export factor binding protein, putative. (158 aa)
PBANKA_1225800Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (210 aa)
PBANKA_1229100Pre-mRNA-splicing factor CWF7, putative. (267 aa)
PBANKA_1039500Zinc finger protein, putative. (531 aa)
PBANKA_1335200Pre-mRNA-splicing factor ISY1, putative. (201 aa)
PBANKA_1340200U6 snRNA-associated Sm-like protein LSm6, putative. (77 aa)
PBANKA_1233300ATP-dependent RNA helicase DDX23, putative. (938 aa)
PBANKA_0831300Peptidyl-prolyl cis-trans isomerase, putative. (593 aa)
PBANKA_1237500Pre-mRNA-splicing factor BUD31, putative. (147 aa)
PBANKA_1319000Uncharacterized protein. (702 aa)
PBANKA_1301700Splicing factor 3A subunit 1, putative. (602 aa)
PBANKA_1307700Pre-mRNA-splicing factor CWC24, putative. (384 aa)
PBANKA_1314400Cwf21 domain-containing protein. (776 aa)
PBANKA_1143000U1 small nuclear ribonucleoprotein 70 kDa homolog, putative. (370 aa)
PBANKA_1309700ATP-dependent RNA helicase DDX5, putative; Belongs to the DEAD box helicase family. (522 aa)
PBANKA_1316400U1 snRNP-associated protein, putative. (318 aa)
PBANKA_1331600Leucine-rich repeat protein. (247 aa)
PBANKA_1140800DUF2040 domain-containing protein. (310 aa)
PBANKA_1332000Splicing factor U2AF large subunit, putative. (697 aa)
PBANKA_0931700Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (167 aa)
PBANKA_1202700RNA-binding protein, putative. (715 aa)
PBANKA_1342900Regulator of nonsense transcripts 3B, putative. (277 aa)
PBANKA_1006700U4/U6 small nuclear ribonucleoprotein PRP31, putative. (516 aa)
PBANKA_1356900U4/U6 small nuclear ribonucleoprotein PRP4, putative. (615 aa)
PBANKA_1435300Pre-mRNA-processing factor 17, putative. (626 aa)
PBANKA_1441900DNA helicase 60, putative; Belongs to the DEAD box helicase family. (715 aa)
PBANKA_1361000Step II splicing factor, putative. (206 aa)
PBANKA_1339400Micro-fibrillar-associated protein, putative. (445 aa)
PBANKA_1363000Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family. (94 aa)
PBANKA_1365300Intron-binding protein aquarius, putative. (2255 aa)
PBANKA_1415000Pre-mRNA-processing factor 40, putative. (789 aa)
PBANKA_1405400U1 small nuclear ribonucleoprotein A, putative. (468 aa)
PBANKA_1409700Alternative splicing regulator, putative. (526 aa)
LSM5U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA. (101 aa)
PBANKA_1425000RNA-binding protein, putative. (843 aa)
PBANKA_1033800Uncharacterized protein. (6521 aa)
PBANKA_1461100Pre-mRNA-splicing factor RBM22, putative. (385 aa)
PBANKA_1103800ATP-dependent RNA helicase DDX27, putative. (495 aa)
PBANKA_1439800Splicing factor 3B subunit 6, putative. (109 aa)
PBANKA_1325300Splicing factor 3B subunit 2, putative. (671 aa)
PBANKA_1407800U4/U6 small nuclear ribonucleoprotein PRP3, putative. (679 aa)
PBANKA_1315200Pre-mRNA-splicing factor CWF18, putative. (148 aa)
PBANKA_1109800Peptidyl-prolyl cis-trans isomerase, putative. (735 aa)
PBANKA_1320200SCD domain-containing protein. (2275 aa)
PBANKA_1339500Uncharacterized protein. (4291 aa)
PBANKA_1341500RNA-binding protein, putative. (510 aa)
PBANKA_1456500Zinc finger protein, putative. (255 aa)
PBANKA_1119000Uncharacterized protein. (2270 aa)
PBANKA_1446200Mitosis protein dim1, putative. (142 aa)
PBANKA_1449400Splicing factor 3B subunit 3, putative. (1218 aa)
PBANKA_1345800RNA-binding protein, putative. (499 aa)
PBANKA_1424800U1 small nuclear ribonucleoprotein C; Component of the spliceosomal U1 snRNP, which is essential for recognition of the pre-mRNA 5' splice-site and the subsequent assembly of the spliceosome. U1-C is directly involved in initial 5' splice-site recognition for both constitutive and regulated alternative splicing. The interaction with the 5' splice-site seems to precede base-pairing between the pre-mRNA and the U1 snRNA. Stimulates commitment or early (E) complex formation by stabilizing the base pairing of the 5' end of the U1 snRNA and the 5' splice-site region. (197 aa)
PBANKA_1341800Uncharacterized protein. (4009 aa)
PBANKA_1405300RED-like protein, putative. (372 aa)
PBANKA_1406300FHA domain-containing protein, putative. (502 aa)
PBANKA_1411800DEAD box helicase, putative. (797 aa)
PBANKA_1450500Pre-mRNA-splicing factor SYF1, putative. (915 aa)
PBANKA_1452400Ubiquitin-like modifier HUB1, putative. (73 aa)
PBANKA_1216900ATP-dependent RNA helicase DDX42, putative. (719 aa)
PBANKA_1413200Pinin/SDK/MemA domain-containing protein, putative. (365 aa)
PBANKA_1419200RNA-binding protein, putative. (128 aa)
PBANKA_1435600Debranching enzyme-associated ribonuclease, putative. (470 aa)
PBANKA_1243300Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (202 aa)
PBANKA_1452800Pre-mRNA-splicing factor CWC22, putative. (901 aa)
PBANKA_1459700Pre-mRNA-splicing factor CWC26, putative. (451 aa)
PBANKA_1462700THO complex subunit 2, putative. (2190 aa)
PBANKA_1332100Zinc finger protein, putative. (779 aa)
PBANKA_1337100Splicing factor 1, putative. (710 aa)
PBANKA_1415500U4/U6.U5 tri-snRNP-associated protein 2, putative. (642 aa)
PBANKA_1446300Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP2, putative. (1057 aa)
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
Server load: low (34%) [HD]