STRINGSTRING
PBANKA_0306800 PBANKA_0306800 PBANKA_0523100 PBANKA_0523100 PBANKA_0813500 PBANKA_0813500 PBANKA_0717500 PBANKA_0717500 PBANKA_0928800 PBANKA_0928800 PBANKA_0721700 PBANKA_0721700 PBANKA_0921600 PBANKA_0921600 PBANKA_0917200 PBANKA_0917200 PBANKA_0622700 PBANKA_0622700 PBANKA_1232100 PBANKA_1232100 PBANKA_1230500 PBANKA_1230500 PBANKA_1332000 PBANKA_1332000 PBANKA_1202700 PBANKA_1202700 PBANKA_1341500 PBANKA_1341500 PBANKA_1462700 PBANKA_1462700
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PBANKA_0306800ATP-dependent RNA helicase UAP56, putative. (466 aa)
PBANKA_0523100Eukaryotic initiation factor 4A-III, putative; Belongs to the DEAD box helicase family. (390 aa)
PBANKA_0813500SAP domain-containing protein, putative. (247 aa)
PBANKA_0717500Nuclear cap-binding protein subunit 2. (239 aa)
PBANKA_0928800Splicing factor U2AF small subunit, putative. (304 aa)
PBANKA_0721700Ran-specific GTPase-activating protein 1, putative. (266 aa)
PBANKA_0921600RNA-binding protein, putative. (728 aa)
PBANKA_0917200RNA-binding protein s1, putative. (144 aa)
PBANKA_0622700Mago nashi protein homologue, putative. (148 aa)
PBANKA_1232100Serine/arginine-rich splicing factor 1, putative. (315 aa)
PBANKA_1230500RNA and export factor binding protein, putative. (158 aa)
PBANKA_1332000Splicing factor U2AF large subunit, putative. (697 aa)
PBANKA_1202700RNA-binding protein, putative. (715 aa)
PBANKA_1341500RNA-binding protein, putative. (510 aa)
PBANKA_1462700THO complex subunit 2, putative. (2190 aa)
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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