STRINGSTRING
PBANKA_0203300 PBANKA_0203300 PBANKA_0303200 PBANKA_0303200 PBANKA_0401900 PBANKA_0401900 PBANKA_0511500 PBANKA_0511500 PBANKA_0202900 PBANKA_0202900 PBANKA_0614100 PBANKA_0614100 PBANKA_0823900 PBANKA_0823900 PBANKA_1311000 PBANKA_1311000 PBANKA_1206300 PBANKA_1206300 PBANKA_1403400 PBANKA_1403400
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PBANKA_0203300DNA-directed RNA polymerase II subunit RPB9, putative. (226 aa)
PBANKA_0303200DNA-directed RNA polymerase II 16 kDa subunit, putative. (133 aa)
PBANKA_0401900DNA-directed RNA polymerases I, II, and III subunit RPABC2, putative. (152 aa)
PBANKA_0511500DNA-directed RNA polymerase II subunit RPB7, putative. (177 aa)
PBANKA_0202900Transcription initiation factor TFIIB, putative. (367 aa)
PBANKA_0614100Transcription initiation factor IIA subunit 1, putative. (173 aa)
PBANKA_0823900DNA-directed RNA polymerase II subunit RPB3, putative. (335 aa)
PBANKA_1311000Uncharacterized protein. (465 aa)
PBANKA_1206300Zinc finger protein, putative. (3586 aa)
PBANKA_1403400DNA-directed RNA polymerase II subunit RPB11, putative. (126 aa)
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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