STRINGSTRING
PBANKA_0303600 PBANKA_0303600 PBANKA_0410300 PBANKA_0410300 PBANKA_0715600 PBANKA_0715600 PBANKA_0813900 PBANKA_0813900 PBANKA_1028700 PBANKA_1028700 PBANKA_1329700 PBANKA_1329700 PBANKA_1144000 PBANKA_1144000 PBANKA_1206600 PBANKA_1206600 PBANKA_1410000 PBANKA_1410000 PBANKA_1242000 PBANKA_1242000 PBANKA_1404900 PBANKA_1404900 PBANKA_1222900 PBANKA_1222900
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PBANKA_030360026S proteasome regulatory subunit RPN1, putative. (993 aa)
PBANKA_041030026S proteasome regulatory subunit RPN12, putative. (303 aa)
PBANKA_071560026S protease regulatory subunit 6B, putative; Belongs to the AAA ATPase family. (395 aa)
PBANKA_081390026S proteasome regulatory subunit RPN8, putative. (319 aa)
PBANKA_102870026S proteasome regulatory subunit RPN13, putative. (252 aa)
PBANKA_132970026S proteasome regulatory subunit RPN2, putative; Belongs to the proteasome subunit S1 family. (1219 aa)
PBANKA_114400026S proteasome regulatory subunit RPN11, putative. (311 aa)
PBANKA_120660026S protease regulatory subunit 4, putative; Belongs to the AAA ATPase family. (447 aa)
PBANKA_141000026S protease regulatory subunit 7, putative; Belongs to the AAA ATPase family. (420 aa)
PBANKA_1242000Ubiquitin carboxyl-terminal hydrolase. (545 aa)
PBANKA_140490026S protease regulatory subunit 10B, putative; Belongs to the AAA ATPase family. (393 aa)
PBANKA_122290026S proteasome regulatory subunit RPN10, putative. (422 aa)
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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