STRINGSTRING
PBANKA_0213500 PBANKA_0213500 PBANKA_0512400 PBANKA_0512400 PBANKA_1036400 PBANKA_1036400 PBANKA_0939200 PBANKA_0939200 PBANKA_1129300 PBANKA_1129300
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PBANKA_0213500Ribosome biogenesis protein BRX1, putative. (349 aa)
PBANKA_0512400rRNA-processing protein EBP2, putative. (385 aa)
PBANKA_1036400Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family. (871 aa)
PBANKA_0939200Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family. (619 aa)
PBANKA_1129300Ribosome biogenesis protein YTM1, putative. (492 aa)
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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