STRINGSTRING
PBANKA_1327000 PBANKA_1327000 PBANKA_0203300 PBANKA_0203300 PBANKA_0303200 PBANKA_0303200 PBANKA_0304200 PBANKA_0304200 PBANKA_0401900 PBANKA_0401900 PBANKA_0305800 PBANKA_0305800 PBANKA_0605200 PBANKA_0605200 PBANKA_0511500 PBANKA_0511500 PBANKA_0520500 PBANKA_0520500 PBANKA_0613200 PBANKA_0613200 PBANKA_0615000 PBANKA_0615000 PBANKA_0834900 PBANKA_0834900 PBANKA_0903200 PBANKA_0903200 PBANKA_0614100 PBANKA_0614100 PBANKA_0905700 PBANKA_0905700 PBANKA_0812000 PBANKA_0812000 PBANKA_0823900 PBANKA_0823900 PBANKA_0913800 PBANKA_0913800 PBANKA_0909900 PBANKA_0909900 PBANKA_1021900 PBANKA_1021900 PBANKA_1004900 PBANKA_1004900 PBANKA_0805400 PBANKA_0805400 PBANKA_0829800 PBANKA_0829800 PBANKA_1130100 PBANKA_1130100 PBANKA_1110300 PBANKA_1110300 PBANKA_1111900 PBANKA_1111900 PBANKA_1109000 PBANKA_1109000 PBANKA_1140600 PBANKA_1140600 PBANKA_0942200 PBANKA_0942200 PBANKA_1027500 PBANKA_1027500 PBANKA_0822500 PBANKA_0822500 PBANKA_1311000 PBANKA_1311000 PBANKA_1302600 PBANKA_1302600 PBANKA_1206300 PBANKA_1206300 PBANKA_1235400 PBANKA_1235400 PBANKA_1454600 PBANKA_1454600 PBANKA_1403400 PBANKA_1403400 PBANKA_1413400 PBANKA_1413400 PBANKA_1429500 PBANKA_1429500 PBANKA_1326900 PBANKA_1326900 PBANKA_1457500 PBANKA_1457500 PBANKA_1327061 PBANKA_1327061 PBANKA_1355800 PBANKA_1355800 PBANKA_1214900 PBANKA_1214900 A0A509AWE5 A0A509AWE5 PBANKA_1322500 PBANKA_1322500 PBANKA_1344000 PBANKA_1344000
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PBANKA_1327000DNA-directed RNA polymerase III subunit RPC4, putative. (338 aa)
PBANKA_0203300DNA-directed RNA polymerase II subunit RPB9, putative. (226 aa)
PBANKA_0303200DNA-directed RNA polymerase II 16 kDa subunit, putative. (133 aa)
PBANKA_0304200DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (106 aa)
PBANKA_0401900DNA-directed RNA polymerases I, II, and III subunit RPABC2, putative. (152 aa)
PBANKA_0305800Uncharacterized protein. (222 aa)
PBANKA_0605200DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1421 aa)
PBANKA_0511500DNA-directed RNA polymerase II subunit RPB7, putative. (177 aa)
PBANKA_0520500TFIIH basal transcription factor complex helicase XPB subunit, putative. (875 aa)
PBANKA_0613200DNA polymerase. (1709 aa)
PBANKA_0615000Transcription initiation factor IIE subunit alpha, putative. (381 aa)
PBANKA_0834900TFIIH basal transcription factor complex helicase XPD subunit, putative. (982 aa)
PBANKA_0903200Uncharacterized protein. (937 aa)
PBANKA_0614100Transcription initiation factor IIA subunit 1, putative. (173 aa)
PBANKA_0905700DNA-directed RNA polymerases I and III subunit RPAC1, putative. (334 aa)
PBANKA_0812000DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (537 aa)
PBANKA_0823900DNA-directed RNA polymerase II subunit RPB3, putative. (335 aa)
PBANKA_0913800DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1474 aa)
PBANKA_0909900WD repeat-containing protein, putative. (1628 aa)
PBANKA_1021900DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (287 aa)
PBANKA_1004900Transcription factor, putative. (370 aa)
PBANKA_0805400DNA-directed RNA polymerases I, II, and III subunit RPABC5, putative. (69 aa)
PBANKA_0829800Transcription initiation factor TFIID subunit 7, putative. (388 aa)
PBANKA_1130100RNA polymerase II transcription factor B subunit 4, putative. (327 aa)
PBANKA_1110300WD repeat-containing protein, putative. (636 aa)
PBANKA_1111900CDK-activating kinase assembly factor MAT1, putative. (260 aa)
PBANKA_1109000DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (2580 aa)
PBANKA_1140600DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative. (205 aa)
PBANKA_0942200DNA-directed RNA polymerase III subunit RPC8, putative. (186 aa)
PBANKA_1027500DNA-directed RNA polymerases I and III subunit RPAC2, putative. (96 aa)
PBANKA_0822500Tetratricopeptide repeat protein, putative. (1618 aa)
PBANKA_1311000Uncharacterized protein. (465 aa)
PBANKA_1302600DNA primase; Belongs to the eukaryotic-type primase small subunit family. (447 aa)
PBANKA_1206300Zinc finger protein, putative. (3586 aa)
PBANKA_1235400CDC73 domain-containing protein, putative. (949 aa)
PBANKA_1454600Uncharacterized protein. (2260 aa)
PBANKA_1403400DNA-directed RNA polymerase II subunit RPB11, putative. (126 aa)
PBANKA_1413400General transcription factor IIH subunit. (401 aa)
PBANKA_1429500DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
PBANKA_1326900DNA polymerase alpha subunit B, putative. (541 aa)
PBANKA_1457500General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (929 aa)
PBANKA_1327061Cyclin 1, putative; Belongs to the cyclin family. (326 aa)
PBANKA_1355800DNA-directed RNA polymerases I, II, and III subunit RPABC4, putative. (58 aa)
PBANKA_1214900BSD domain-containing protein. (694 aa)
A0A509AWE5DNA-directed RNA polymerase subunit beta'', putative. (964 aa)
PBANKA_1322500DNA-directed RNA polymerase III subunit RPC5, putative. (739 aa)
PBANKA_1344000DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (2012 aa)
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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