STRINGSTRING
PBANKA_0829800 PBANKA_0829800 PBANKA_0616800 PBANKA_0616800 PBANKA_0710800 PBANKA_0710800 PBANKA_0604500 PBANKA_0604500 PBANKA_0202900 PBANKA_0202900 PBANKA_0102400 PBANKA_0102400 PBANKA_0615000 PBANKA_0615000 PBANKA_0618500 PBANKA_0618500 PBANKA_0604300 PBANKA_0604300 PBANKA_0819900 PBANKA_0819900 PBANKA_0714000 PBANKA_0714000 PBANKA_0941800 PBANKA_0941800 PBANKA_1036000 PBANKA_1036000 PBANKA_0602700 PBANKA_0602700 PBANKA_0941900 PBANKA_0941900 PBANKA_1127300 PBANKA_1127300 PBANKA_1101600 PBANKA_1101600 PBANKA_1313000 PBANKA_1313000 PBANKA_1206300 PBANKA_1206300 PBANKA_1420600 PBANKA_1420600 PBANKA_1327400 PBANKA_1327400 PBANKA_1439400 PBANKA_1439400 PBANKA_1026800 PBANKA_1026800 PBANKA_1417900 PBANKA_1417900
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PBANKA_0829800Transcription initiation factor TFIID subunit 7, putative. (388 aa)
PBANKA_0616800Actin-related protein, putative; Belongs to the actin family. (905 aa)
PBANKA_0710800Helicase SRCAP, putative. (1906 aa)
PBANKA_0604500High mobility group protein B3, putative. (2264 aa)
PBANKA_0202900Transcription initiation factor TFIIB, putative. (367 aa)
PBANKA_0102400AT-rich interactive domain-containing protein, putative. (1841 aa)
PBANKA_0615000Transcription initiation factor IIE subunit alpha, putative. (381 aa)
PBANKA_0618500Uncharacterized protein. (2552 aa)
PBANKA_0604300Tetratricopeptide repeat protein, putative. (330 aa)
PBANKA_0819900Nucleosome assembly protein; Belongs to the nucleosome assembly protein (NAP) family. (267 aa)
PBANKA_0714000Meiotic recombination protein DMC1; Belongs to the RecA family. (346 aa)
PBANKA_0941800Histone H2B; Belongs to the histone H2B family. (118 aa)
PBANKA_1036000Transcription elongation factor SPT6, putative. (2437 aa)
PBANKA_0602700Nucleosome assembly protein, putative; Belongs to the nucleosome assembly protein (NAP) family. (345 aa)
PBANKA_0941900Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
PBANKA_1127300DNA methyltransferase 1-associated protein 1, putative. (385 aa)
PBANKA_1101600Protein HIRA; Required for replication-independent chromatin assembly and for the periodic repression of histone gene transcription during the cell cycle; Belongs to the WD repeat HIR1 family. (917 aa)
PBANKA_1313000Transcription factor IIIb subunit, putative. (721 aa)
PBANKA_1206300Zinc finger protein, putative. (3586 aa)
PBANKA_1420600Histone H2B; Belongs to the histone H2B family. (123 aa)
PBANKA_1327400YL1 nuclear protein, putative. (618 aa)
PBANKA_1439400Histone chaperone ASF1, putative. (268 aa)
PBANKA_1026800Zinc finger protein, putative. (142 aa)
PBANKA_1417900Uncharacterized protein. (1052 aa)
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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