STRINGSTRING
PBANKA_1109000 PBANKA_1109000 PBANKA_1004900 PBANKA_1004900 PBANKA_0905700 PBANKA_0905700 PBANKA_0401900 PBANKA_0401900 A0A509AWE5 A0A509AWE5 PBANKA_1355800 PBANKA_1355800 PBANKA_1429500 PBANKA_1429500 PBANKA_1027500 PBANKA_1027500 PBANKA_1140600 PBANKA_1140600 PBANKA_0805400 PBANKA_0805400
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PBANKA_1109000DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (2580 aa)
PBANKA_1004900Transcription factor, putative. (370 aa)
PBANKA_0905700DNA-directed RNA polymerases I and III subunit RPAC1, putative. (334 aa)
PBANKA_0401900DNA-directed RNA polymerases I, II, and III subunit RPABC2, putative. (152 aa)
A0A509AWE5DNA-directed RNA polymerase subunit beta'', putative. (964 aa)
PBANKA_1355800DNA-directed RNA polymerases I, II, and III subunit RPABC4, putative. (58 aa)
PBANKA_1429500DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
PBANKA_1027500DNA-directed RNA polymerases I and III subunit RPAC2, putative. (96 aa)
PBANKA_1140600DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative. (205 aa)
PBANKA_0805400DNA-directed RNA polymerases I, II, and III subunit RPABC5, putative. (69 aa)
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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