STRINGSTRING
PBANKA_0203300 PBANKA_0203300 PBANKA_0303200 PBANKA_0303200 PBANKA_0304200 PBANKA_0304200 PBANKA_0401900 PBANKA_0401900 PBANKA_0605200 PBANKA_0605200 PBANKA_0511500 PBANKA_0511500 PBANKA_0905700 PBANKA_0905700 PBANKA_0807000 PBANKA_0807000 PBANKA_0823900 PBANKA_0823900 PBANKA_0913800 PBANKA_0913800 PBANKA_1021900 PBANKA_1021900 PBANKA_0312400 PBANKA_0312400 PBANKA_0805400 PBANKA_0805400 PBANKA_1109000 PBANKA_1109000 PBANKA_1135500 PBANKA_1135500 PBANKA_1140600 PBANKA_1140600 PBANKA_0942200 PBANKA_0942200 PBANKA_1027500 PBANKA_1027500 PBANKA_1406100 PBANKA_1406100 PBANKA_1403400 PBANKA_1403400 PBANKA_1429500 PBANKA_1429500 PBANKA_1335900 PBANKA_1335900 PBANKA_1355800 PBANKA_1355800 PBANKA_1344000 PBANKA_1344000
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
PBANKA_0203300DNA-directed RNA polymerase II subunit RPB9, putative. (226 aa)
PBANKA_0303200DNA-directed RNA polymerase II 16 kDa subunit, putative. (133 aa)
PBANKA_0304200DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (106 aa)
PBANKA_0401900DNA-directed RNA polymerases I, II, and III subunit RPABC2, putative. (152 aa)
PBANKA_0605200DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1421 aa)
PBANKA_0511500DNA-directed RNA polymerase II subunit RPB7, putative. (177 aa)
PBANKA_0905700DNA-directed RNA polymerases I and III subunit RPAC1, putative. (334 aa)
PBANKA_0807000DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (2310 aa)
PBANKA_0823900DNA-directed RNA polymerase II subunit RPB3, putative. (335 aa)
PBANKA_0913800DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1474 aa)
PBANKA_1021900DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (287 aa)
PBANKA_0312400DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1312 aa)
PBANKA_0805400DNA-directed RNA polymerases I, II, and III subunit RPABC5, putative. (69 aa)
PBANKA_1109000DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (2580 aa)
PBANKA_1135500High mobility group protein B4, putative. (252 aa)
PBANKA_1140600DNA-directed RNA polymerases I, II, and III subunit RPABC1, putative. (205 aa)
PBANKA_0942200DNA-directed RNA polymerase III subunit RPC8, putative. (186 aa)
PBANKA_1027500DNA-directed RNA polymerases I and III subunit RPAC2, putative. (96 aa)
PBANKA_1406100DNA-directed RNA polymerase subunit alpha, putative. (669 aa)
PBANKA_1403400DNA-directed RNA polymerase II subunit RPB11, putative. (126 aa)
PBANKA_1429500DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (143 aa)
PBANKA_1335900DNA-directed RNA polymerase, alpha subunit, putative. (805 aa)
PBANKA_1355800DNA-directed RNA polymerases I, II, and III subunit RPABC4, putative. (58 aa)
PBANKA_1344000DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (2012 aa)
Your Current Organism:
Plasmodium berghei
NCBI taxonomy Id: 5823
Other names: P. berghei ANKA, Plasmodium berghei (strain ANKA), Plasmodium berghei ANKA, Plasmodium berghei str. ANKA, Plasmodium berghei strain ANKA
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