STRINGSTRING
KMY28996.1 KMY28996.1 KMY33562.1 KMY33562.1 KMY33855.1 KMY33855.1 KMY31275.1 KMY31275.1 KMY31434.1 KMY31434.1 KMY31435.1 KMY31435.1 KMY33195.1 KMY33195.1 KMY31720.1 KMY31720.1 KMY32055.1 KMY32055.1 gyrB-2 gyrB-2 parC parC KMY32205.1 KMY32205.1 KMY32498.1 KMY32498.1 KMY32762.1 KMY32762.1 KMY32908.1 KMY32908.1 KMY32909.1 KMY32909.1 recU recU KMY30445.1 KMY30445.1 KMY29453.1 KMY29453.1 smc smc xerC xerC KMY29599.1 KMY29599.1 xerD xerD scpA scpA scpB scpB KMY28421.1 KMY28421.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KMY28996.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)
KMY33562.1Plasmid partitioning protein ParB; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the ParB family. (282 aa)
KMY33855.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (267 aa)
KMY31275.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (100 aa)
KMY31434.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (107 aa)
KMY31435.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (137 aa)
KMY33195.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)
KMY31720.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
KMY32055.1Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (77 aa)
gyrB-2DNA gyrase subunit B; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase family. ParE type 2 subfamily. (658 aa)
parCDNA gyrase subunit A; Topoisomerase IV is essential for chromosome segregation. It relaxes supercoiled DNA. Performs the decatenation events required during the replication of a circular DNA molecule; Belongs to the type II topoisomerase GyrA/ParC subunit family. ParC type 2 subfamily. (810 aa)
KMY32205.1Recombinase XerC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family. (325 aa)
KMY32498.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (359 aa)
KMY32762.1Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (77 aa)
KMY32908.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (141 aa)
KMY32909.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (106 aa)
recUHolliday junction resolvase; Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation; Belongs to the RecU family. (216 aa)
KMY30445.1Cell division protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FtsK/SpoIIIE/SftA family. (1075 aa)
KMY29453.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)
smcChromosome segregation protein SMC; Required for chromosome condensation and partitioning. Belongs to the SMC family. (1193 aa)
xerCRecombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (299 aa)
KMY29599.1Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the FtsK/SpoIIIE/SftA family. (762 aa)
xerDRecombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (300 aa)
scpASegregation and condensation protein A; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves. (259 aa)
scpBSegregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves. (197 aa)
KMY28421.1Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
Your Current Organism:
Lysinibacillus xylanilyticus
NCBI taxonomy Id: 582475
Other names: CCUG 57438, DSM 23493, KCTC 13423, L. xylanilyticus, Lysinibacillus sp. JKR42, Lysinibacillus sp. XDB9, Lysinibacillus xylanilyticus Lee et al. 2010, Microbacterium sp. CHR3P2B2-M, strain XDB9
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