STRINGSTRING
KMY33195.1 KMY33195.1 KMY31720.1 KMY31720.1 KMY32055.1 KMY32055.1 KMY32205.1 KMY32205.1 KMY32762.1 KMY32762.1 xerC xerC xerD xerD KMY28421.1 KMY28421.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KMY33195.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (314 aa)
KMY31720.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (262 aa)
KMY32055.1Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (77 aa)
KMY32205.1Recombinase XerC; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the 'phage' integrase family. (325 aa)
KMY32762.1Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (77 aa)
xerCRecombinase XerC; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (299 aa)
xerDRecombinase XerD; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids. (300 aa)
KMY28421.1Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology. (308 aa)
Your Current Organism:
Lysinibacillus xylanilyticus
NCBI taxonomy Id: 582475
Other names: CCUG 57438, DSM 23493, KCTC 13423, L. xylanilyticus, Lysinibacillus sp. JKR42, Lysinibacillus sp. XDB9, Lysinibacillus xylanilyticus Lee et al. 2010, Microbacterium sp. CHR3P2B2-M, strain XDB9
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