STRINGSTRING
ERN43154.1 ERN43154.1 ERN43098.1 ERN43098.1 ERN43049.1 ERN43049.1 ERN42709.1 ERN42709.1 ERN42630.1 ERN42630.1 ERN42609.1 ERN42609.1 ERN42493.1 ERN42493.1 ERN42540.1 ERN42540.1 ERN42335.1 ERN42335.1 ERN42290.1 ERN42290.1 ERN42152.1 ERN42152.1 xseA xseA xseB xseB ERN41848.1 ERN41848.1 ERN41775.1 ERN41775.1 ERN41663.1 ERN41663.1 ERN41551.1 ERN41551.1 ERN41456.1 ERN41456.1 ERN41457.1 ERN41457.1 ERN41497.1 ERN41497.1 ERN41187.1 ERN41187.1 ERN40872.1 ERN40872.1 ERN40742.1 ERN40742.1 ERN40774.1 ERN40774.1 ERN40780.1 ERN40780.1 ERN40425.1 ERN40425.1 ERN40517.1 ERN40517.1 ERN40314.1 ERN40314.1 ERN40078.1 ERN40078.1 ERN40186.1 ERN40186.1 ERN39919.1 ERN39919.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ERN43154.1SagB-type dehydrogenase domain protein; COG: Nitroreductase; PFAM: Nitroreductase - Nitroreductase family; TIGRFAM: SagB-type dehydrogenase domain. (513 aa)
ERN43098.1Hypothetical protein; COG: Flagellar biosynthesis/type III secretory pathway protein. (314 aa)
ERN43049.1COG: Predicted permease, DMT superfamily; PFAM: EamA - EamA-like transporter family. (316 aa)
ERN42709.1Hypothetical protein. (702 aa)
ERN42630.1Hypothetical protein. (314 aa)
ERN42609.1Hypothetical protein. (141 aa)
ERN42493.1Hypothetical protein; COG: U5 snRNP spliceosome subunit. (356 aa)
ERN42540.1PFAM: DUF3318 - Protein of unknown function (DUF3318). (204 aa)
ERN42335.1COG: Predicted membrane protein. (132 aa)
ERN42290.1COG: Zn-dependent protease with chaperone function; PFAM: Peptidase_M48 - Peptidase family M48. (755 aa)
ERN42152.1PFAM: Ycf66_N - Ycf66 protein N-terminus. (212 aa)
xseAExodeoxyribonuclease VII, large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (397 aa)
xseBExonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (89 aa)
ERN41848.1Hypothetical protein; COG:; PFAM:; TIGRFAM:. (71 aa)
ERN41775.1Hypothetical protein. (88 aa)
ERN41663.1Hypothetical protein. (184 aa)
ERN41551.1COG: Phage-related tail protein. (384 aa)
ERN41456.1Hypothetical protein. (78 aa)
ERN41457.1Hypothetical protein. (64 aa)
ERN41497.1Hypothetical protein. (241 aa)
ERN41187.1Hypothetical protein. (115 aa)
ERN40872.1Hypothetical protein; PFAM: DUF4340 - Domain of unknown function (DUF4340). (228 aa)
ERN40742.1COG: Predicted transcriptional regulators; PFAM: PadR - Transcriptional regulator PadR-like family. (134 aa)
ERN40774.1COG: DnaJ-class molecular chaperone with C-terminal Zn finger domain; PFAM: DnaJ - DnaJ domain. (215 aa)
ERN40780.1Hypothetical protein. (362 aa)
ERN40425.1Hypothetical protein. (294 aa)
ERN40517.1Hypothetical protein. (175 aa)
ERN40314.1Hypothetical protein. (180 aa)
ERN40078.1Hypothetical protein. (267 aa)
ERN40186.1Hypothetical protein. (211 aa)
ERN39919.1COG: Membrane protein involved in the export of O-antigen and teichoic acid. (224 aa)
Your Current Organism:
Rubidibacter lacunae
NCBI taxonomy Id: 582515
Other names: R. lacunae KORDI 51-2, Rubidibacter lacunae KCTC 40015, Rubidibacter lacunae KORDI 51-2, Rubidibacter lacunae UTEX L2944
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