STRINGSTRING
Hden_1608 Hden_1608 Hden_0513 Hden_0513 Hden_0777 Hden_0777 Hden_2652 Hden_2652
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Hden_1608KEGG: mea:Mex_1p1755 formyltransferase/hydrolase complex Fhc subunit C; TIGRFAM: formylmethanofuran dehydrogenase subunit C; PFAM: glutamate synthase alpha subunit domain protein. (269 aa)
Hden_0513PFAM: glutamate synthase alpha subunit domain protein; KEGG: ret:RHE_PE00420 formyl-methanofuran dehydrogenase domain-containing protein. (228 aa)
Hden_0777PFAM: glutamate synthase alpha subunit domain protein; KEGG: mch:Mchl_1939 glutamate synthase alpha subunit domain protein. (229 aa)
Hden_2652KEGG: bid:Bind_3031 glutamate synthase (ferredoxin); PFAM: glutamate synthase; ferredoxin-dependent glutamate synthase; glutamate synthase alpha subunit domain protein; glutamine amidotransferase class-II. (1574 aa)
Your Current Organism:
Hyphomicrobium denitrificans ATCC 51888
NCBI taxonomy Id: 582899
Other names: H. denitrificans ATCC 51888, Hyphomicrobium denitrificans str. ATCC 51888, Hyphomicrobium denitrificans strain ATCC 51888
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