STRINGSTRING
Hden_0196 Hden_0196 Hden_0197 Hden_0197 Hden_3413 Hden_3413 Hden_3414 Hden_3414
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Hden_0196PFAM: Electron transfer flavoprotein alpha/beta-subunit; protein of unknown function DUF224 cysteine-rich region domain protein; 4Fe-4S ferredoxin iron-sulfur binding domain protein; KEGG: bph:Bphy_5959 hypothetical protein. (1065 aa)
Hden_0197KEGG: bph:Bphy_5956 electron transfer flavoprotein alpha subunit; PFAM: Electron transfer flavoprotein alpha/beta-subunit; Electron transfer flavoprotein alpha subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit. (321 aa)
Hden_3413KEGG: atc:AGR_L_2463 electron transfer flavoprotein beta-subunit (beta-ETF) (electron transfer flavoprotein small subunit) (ETFSS); PFAM: Electron transfer flavoprotein alpha/beta-subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit. (251 aa)
Hden_3414KEGG: rpa:RPA4749 electron transfer flavoprotein subunit alpha; PFAM: Electron transfer flavoprotein alpha subunit; Electron transfer flavoprotein alpha/beta-subunit; SMART: Electron transfer flavoprotein alpha/beta-subunit. (314 aa)
Your Current Organism:
Hyphomicrobium denitrificans ATCC 51888
NCBI taxonomy Id: 582899
Other names: H. denitrificans ATCC 51888, Hyphomicrobium denitrificans str. ATCC 51888, Hyphomicrobium denitrificans strain ATCC 51888
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