STRINGSTRING
Hden_0514 Hden_0514 Hden_0778 Hden_0778 Hden_0996 Hden_0996
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Hden_0514PFAM: ferredoxin-dependent glutamate synthase; KEGG: rlg:Rleg_6577 ferredoxin-dependent glutamate synthase; Belongs to the glutamate synthase family. (446 aa)
Hden_0778PFAM: ferredoxin-dependent glutamate synthase; KEGG: mei:Msip34_2421 ferredoxin-dependent glutamate synthase; Belongs to the glutamate synthase family. (443 aa)
Hden_0996PFAM: 2-nitropropane dioxygenase NPD; KEGG: mno:Mnod_8517 2-nitropropane dioxygenase NPD. (326 aa)
Your Current Organism:
Hyphomicrobium denitrificans ATCC 51888
NCBI taxonomy Id: 582899
Other names: H. denitrificans ATCC 51888, Hyphomicrobium denitrificans str. ATCC 51888, Hyphomicrobium denitrificans strain ATCC 51888
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