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| | Mmol_0125 | PFAM: Metal-dependent hydrolase HDOD; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: azo:azo1256 putative serine/threonine protein kinase. (775 aa) |
| | Mmol_0168 | Two component transcriptional regulator, LytTR family; PFAM: response regulator receiver; LytTr DNA-binding region; SMART: response regulator receiver; KEGG: mfa:Mfla_0036 LytR/AlgR family transcriptional regulator. (255 aa) |
| | Mmol_0169 | PFAM: histidine kinase internal region; KEGG: mfa:Mfla_0037 histidine kinase internal region. (334 aa) |
| | Mmol_0171 | Oxygen-independent coproporphyrinogen III oxidase; Probably acts as a heme chaperone, transferring heme to an unknown acceptor. Binds one molecule of heme per monomer, possibly covalently. Binds 1 [4Fe-4S] cluster. The cluster is coordinated with 3 cysteines and an exchangeable S-adenosyl-L-methionine. Belongs to the anaerobic coproporphyrinogen-III oxidase family. (385 aa) |
| | Mmol_0172 | KEGG: mfa:Mfla_0041 hypothetical protein. (73 aa) |
| | Mmol_0173 | Non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. (207 aa) |
| | rph | Ribonuclease PH; Phosphorolytic 3'-5' exoribonuclease that plays an important role in tRNA 3'-end maturation. Removes nucleotide residues following the 3'-CCA terminus of tRNAs; can also add nucleotides to the ends of RNA molecules by using nucleoside diphosphates as substrates, but this may not be physiologically important. Probably plays a role in initiation of 16S rRNA degradation (leading to ribosome degradation) during starvation. (241 aa) |
| | Mmol_0175 | PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein; KEGG: mfa:Mfla_0044 protein serine/threonine phosphatases. (303 aa) |
| | Mmol_0176 | PFAM: Serine/threonine protein kinase-related; tyrosine protein kinase; SMART: serine/threonine protein kinase; tyrosine protein kinase; KEGG: mfa:Mfla_0045 serine/threonine protein kinase. (324 aa) |
| | Mmol_0177 | PFAM: domain of unknown function DUF1732; YicC domain protein; KEGG: mfa:Mfla_0046 hypothetical protein. (288 aa) |
| | Mmol_0190 | Hypothetical protein; KEGG: dar:Daro_3369 peptidoglycan-binding LysM. (790 aa) |
| | Mmol_0240 | Two component, sigma54 specific, transcriptional regulator, Fis family; PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; response regulator receiver; ATPase associated with various cellular activities AAA_5; SMART: response regulator receiver; AAA ATPase; KEGG: mfa:Mfla_0074 two component, sigma54 specific, fis family transcriptional regulator. (473 aa) |
| | Mmol_0241 | PFAM: Sporulation domain protein; KEGG: mfa:Mfla_0075 general secretion pathway protein, ATPase. (515 aa) |
| | Mmol_0242 | TIGRFAM: pilus (MSHA type) biogenesis protein MshL; PFAM: type II and III secretion system protein; KEGG: mfa:Mfla_0076 type II and III secretion system protein. (610 aa) |
| | Mmol_0243 | SMART: Tetratricopeptide domain protein; KEGG: mfa:Mfla_0077 TPR repeat-containing protein. (512 aa) |
| | Mmol_0244 | PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: mfa:Mfla_0078 type II secretion system protein E. (568 aa) |
| | Mmol_0245 | PFAM: type II secretion system protein; KEGG: mfa:Mfla_0079 type II secretion system protein. (401 aa) |
| | Mmol_0246 | KEGG: mfa:Mfla_0080 hypothetical protein. (549 aa) |
| | Mmol_0247 | KEGG: mfa:Mfla_0081 hypothetical protein. (209 aa) |
| | Mmol_0248 | KEGG: mfa:Mfla_0082 hypothetical protein. (177 aa) |
| | Mmol_0249 | KEGG: mfa:Mfla_0083 hypothetical protein. (585 aa) |
| | Mmol_0250 | Conserved hypothetical protein; KEGG: mfa:Mfla_0084 methylation. (264 aa) |
| | Mmol_0298 | Signal transduction histidine kinase regulating citrate/malate metabolism; PFAM: ATP-binding region ATPase domain protein; SMART: ATP-binding region ATPase domain protein; KEGG: mfa:Mfla_0235 ATP-binding region, ATPase-like protein. (547 aa) |
| | Mmol_0299 | KEGG: tbd:Tbd_0540 hypothetical protein. (224 aa) |
| | Mmol_0438 | KEGG: mfa:Mfla_0382 hypothetical protein. (105 aa) |
| | Mmol_0456 | PFAM: Lytic transglycosylase catalytic; KEGG: mfa:Mfla_0421 lytic transglycosylase, catalytic. (209 aa) |
| | Mmol_0503 | KEGG: dar:Daro_3360 protein phosphatase 2C-like; PFAM: Protein phosphatase 2C-like; SMART: protein phosphatase 2C domain protein. (280 aa) |
| | Mmol_0504 | FHA domain containing protein; PFAM: Forkhead-associated protein; SMART: Forkhead-associated protein; KEGG: dar:Daro_3359 forkhead-associated. (243 aa) |
| | Mmol_0505 | Putative metal dependent phosphohydrolase; PFAM: GAF domain protein; SMART: GAF domain protein; KEGG: dar:Daro_3357 hypothetical protein. (548 aa) |
| | Mmol_0509 | PFAM: ErfK/YbiS/YcfS/YnhG family protein; KEGG: mfa:Mfla_0498 ErfK/YbiS/YcfS/YnhG. (417 aa) |
| | Mmol_0510 | PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: mfa:Mfla_0499 tetratricopeptide TPR_2. (330 aa) |
| | Mmol_0518 | Prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. (289 aa) |
| | Mmol_0568 | PFAM: protein of unknown function DUF1058; KEGG: mfa:Mfla_2184 hypothetical protein. (150 aa) |
| | Mmol_0571 | KEGG: mfa:Mfla_2181 hypothetical protein. (253 aa) |
| | Mmol_0594 | PFAM: type II secretion system protein; KEGG: mfa:Mfla_2142 type II secretion system protein. (407 aa) |
| | Mmol_0595 | TIGRFAM: type IV-A pilus assembly ATPase PilB; PFAM: type II secretion system protein E; General secretory system II protein E domain protein; KEGG: mfa:Mfla_2141 type II secretion system protein E. (574 aa) |
| | Mmol_0608 | PFAM: beta-lactamase domain protein; KEGG: net:Neut_2129 cyclic-AMP phosphodiesterase. (260 aa) |
| | Mmol_0610 | PFAM: Isoprenylcysteine carboxyl methyltransferase; KEGG: reu:Reut_A2629 hypothetical protein. (216 aa) |
| | Mmol_0611 | Hypothetical protein; KEGG: tbd:Tbd_2200 pilus assembly protein PilA. (120 aa) |
| | Mmol_0619 | PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: mfa:Mfla_2118 type II secretion system protein E. (594 aa) |
| | Mmol_0632 | TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: mfa:Mfla_2107 twitching motility protein. (347 aa) |
| | Mmol_0633 | TIGRFAM: twitching motility protein; PFAM: type II secretion system protein E; KEGG: mfa:Mfla_2106 twitching motility protein. (378 aa) |
| | Mmol_0643 | TIGRFAM: DNA internalization-related competence protein ComEC/Rec2; ComEC/Rec2-related protein; PFAM: ComEC/Rec2-related protein; beta-lactamase domain protein; KEGG: mfa:Mfla_2093 DNA internalization-related competence protein ComEC/Rec2. (795 aa) |
| | Mmol_0659 | KEGG: mfa:Mfla_2079 hypothetical protein. (222 aa) |
| | Mmol_0714 | Transcriptional regulator, Crp/Fnr family; PFAM: cyclic nucleotide-binding; regulatory protein Crp; SMART: cyclic nucleotide-binding; regulatory protein Crp; KEGG: aav:Aave_1530 Crp/FNR family transcriptional regulator. (247 aa) |
| | Mmol_0715 | PFAM: Radical SAM domain protein; KEGG: tbd:Tbd_0729 hypothetical protein. (282 aa) |
| | Mmol_0850 | PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: mms:mma_3687 hypothetical protein. (846 aa) |
| | Mmol_0888 | KEGG: tbd:Tbd_0552 hypothetical protein. (567 aa) |
| | Mmol_0960 | KEGG: mfa:Mfla_1142 hypothetical protein. (169 aa) |
| | Mmol_0976 | KEGG: mfa:Mfla_1701 hypothetical protein. (1038 aa) |
| | Mmol_0977 | KEGG: aeh:Mlg_1233 hypothetical protein. (209 aa) |
| | truA | tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. (261 aa) |
| | Mmol_0984 | PFAM: Sporulation domain protein; KEGG: mfa:Mfla_1694 sporulation related. (263 aa) |
| | Mmol_0985 | PFAM: Colicin V production protein; KEGG: mfa:Mfla_1693 colicin V production protein. (163 aa) |
| | Mmol_0988 | PFAM: beta-lactamase domain protein; KEGG: azo:azo1428 flavoprotein. (257 aa) |
| | Mmol_1069 | KEGG: mfa:Mfla_1350 hypothetical protein. (322 aa) |
| | Mmol_1070 | KEGG: mfa:Mfla_1350 hypothetical protein. (305 aa) |
| | Mmol_1071 | TIGRFAM: general secretion pathway protein G; PFAM: type II secretion system protein G; KEGG: mfa:Mfla_1343 general secretion pathway protein G. (140 aa) |
| | Mmol_1072 | PFAM: type II secretion system protein; KEGG: mfa:Mfla_1342 type II secretion system protein. (395 aa) |
| | Mmol_1073 | PFAM: type II secretion system protein E; KEGG: mfa:Mfla_1341 type II secretion system protein E. (586 aa) |
| | Mmol_1074 | KEGG: mfa:Mfla_1340 hypothetical protein. (296 aa) |
| | Mmol_1075 | KEGG: mfa:Mfla_1339 hypothetical protein. (173 aa) |
| | Mmol_1076 | KEGG: mfa:Mfla_1338 putative transmembrane protein. (185 aa) |
| | Mmol_1077 | KEGG: mfa:Mfla_1337 hypothetical protein. (170 aa) |
| | Mmol_1078 | PFAM: type II and III secretion system protein; NolW domain protein; Secretin/TonB short domain; KEGG: mfa:Mfla_1336 type II and III secretion system protein; Belongs to the bacterial secretin family. (659 aa) |
| | Mmol_1079 | Conserved hypothetical protein; KEGG: mfa:Mfla_1335 methylation. (161 aa) |
| | Mmol_1080 | PFAM: type II secretion system protein G; KEGG: mfa:Mfla_1334 methylation. (128 aa) |
| | Mmol_1081 | KEGG: mfa:Mfla_1333 hypothetical protein. (156 aa) |
| | Mmol_1084 | ZipA FtsZ-binding region; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins. Belongs to the ZipA family. (507 aa) |
| | Mmol_1169 | Putative signal transduction protein; PFAM: Metal-dependent hydrolase HDOD; KEGG: neu:NE1858 hypothetical protein. (280 aa) |
| | Mmol_1189 | KEGG: pol:Bpro_0065 hypothetical protein. (434 aa) |
| | Mmol_1190 | PFAM: tyrosine protein kinase; leucine-rich repeat protein; SMART: serine/threonine protein kinase; tyrosine protein kinase; leucine-rich repeat-containing protein typical subtype; KEGG: dar:Daro_1854 serine/threonine protein kinase. (468 aa) |
| | Mmol_1191 | PFAM: conserved hypothetical protein; KEGG: tbd:Tbd_2429 hypothetical protein. (154 aa) |
| | Mmol_1192 | PFAM: type II secretion system protein E; General secretory system II protein E domain protein; SMART: AAA ATPase; KEGG: har:HEAR1953 general secretion pathway protein E (type II traffic warden ATPase). (567 aa) |
| | Mmol_1193 | PFAM: type II secretion system protein; KEGG: dar:Daro_0880 type II secretion system protein. (408 aa) |
| | Mmol_1194 | KEGG: dar:Daro_0881 hypothetical protein. (155 aa) |
| | Mmol_1195 | KEGG: dar:Daro_0882 general secretion pathway protein H. (180 aa) |
| | Mmol_1196 | KEGG: har:HEAR1950 mannose-sensitive hemagglutinin a (partial). (148 aa) |
| | Mmol_1197 | KEGG: tbd:Tbd_0755 general secretion pathway protein H. (153 aa) |
| | Mmol_1198 | KEGG: tbd:Tbd_0756 hypothetical protein. (225 aa) |
| | Mmol_1199 | KEGG: dar:Daro_0886 general secretion pathway protein H. (281 aa) |
| | Mmol_1200 | KEGG: tbd:Tbd_0758 hypothetical protein. (156 aa) |
| | Mmol_1201 | KEGG: lch:Lcho_3101 hypothetical protein. (360 aa) |
| | Mmol_1202 | KEGG: lch:Lcho_3101 hypothetical protein. (796 aa) |
| | Mmol_1203 | KEGG: har:HEAR1943 putative mannose-sensitive agglutinin (MSHA) biogenesis protein MshI. (318 aa) |
| | Mmol_1204 | KEGG: har:HEAR1942 putative mannose-sensitive agglutinin (MSHA) biogenesis protein MshI (pilus type IV); putative signal peptide. (249 aa) |
| | Mmol_1205 | KEGG: har:HEAR1941 putative mannose-sensitive agglutinin (MSHA) biogenesis protein MshJ (pilus type IV); putative signal peptide. (240 aa) |
| | Mmol_1206 | Hypothetical protein; KEGG: har:HEAR1940 putative mannose-sensitive agglutinin (MSHA) biogenesis protein MshK (pilus type IV), lipoprotein. (134 aa) |
| | Mmol_1207 | PFAM: type II and III secretion system protein; Secretin/TonB short domain; KEGG: har:HEAR1939 mannose-sensitive hemagglutinin L. (583 aa) |
| | Mmol_1208 | KEGG: dar:Daro_0894 general secretion pathway protein, ATPase. (306 aa) |
| | Mmol_1209 | PFAM: Tetratricopeptide TPR_2 repeat protein; TPR repeat-containing protein; SMART: Tetratricopeptide domain protein; KEGG: har:HEAR1937 putative MSHA biogenesis protein MshN. (446 aa) |
| | Mmol_1264 | KEGG: mfa:Mfla_1941 hypothetical protein. (264 aa) |
| | Mmol_1290 | CheA signal transduction histidine kinase; PFAM: response regulator receiver; CheW domain protein; Hpt domain protein; ATP-binding region ATPase domain protein; SMART: response regulator receiver; Hpt domain protein; CheW domain protein; ATP-binding region ATPase domain protein; KEGG: mfa:Mfla_1246 CheA signal transduction histidine kinases. (1729 aa) |
| | Mmol_1291 | PFAM: chemotaxis sensory transducer; SMART: chemotaxis sensory transducer; KEGG: mfa:Mfla_1245 methyl-accepting chemotaxis sensory transducer. (577 aa) |
| | Mmol_1292 | PFAM: CheW domain protein; SMART: CheW domain protein; KEGG: mfa:Mfla_1244 CheW protein. (171 aa) |
| | Mmol_1293 | PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: mfa:Mfla_1243 response regulator receiver domain-containing protein. (121 aa) |
| | Mmol_1294 | PFAM: response regulator receiver; SMART: response regulator receiver; KEGG: tbd:Tbd_2552 response regulator receiver domain-containing protein. (147 aa) |
| | Mmol_1371 | PFAM: Rieske [2Fe-2S] domain protein; KEGG: mfa:Mfla_1711 Rieske (2Fe-2S) region. (369 aa) |
| | Mmol_1372 | PFAM: protein of unknown function DUF6 transmembrane; KEGG: mfa:Mfla_1712 hypothetical protein. (287 aa) |
| | Mmol_1458 | PFAM: RES domain protein; KEGG: pen:PSEEN2057 hypothetical protein. (426 aa) |
| | Mmol_1501 | KEGG: cja:CJA_1892 P(-)rp(+) fimbrial protein; Belongs to the N-Me-Phe pilin family. (179 aa) |
| | Mmol_1522 | KEGG: dar:Daro_0466 competence protein ComEA helix-hairpin-helix region; TIGRFAM: competence protein ComEA helix-hairpin-helix repeat protein; PFAM: helix-hairpin-helix motif; SMART: Helix-hairpin-helix DNA-binding class 1. (210 aa) |
| | ycgR | YcgR family protein; Acts as a flagellar brake, regulating swimming and swarming in a bis-(3'-5') cyclic diguanylic acid (c-di-GMP)-dependent manner. Binds 1 c-di-GMP dimer per subunit. Increasing levels of c-di-GMP lead to decreased motility. (253 aa) |
| | Mmol_1577 | Transcriptional regulator, AraC family; SMART: helix-turn-helix- domain containing protein AraC type; KEGG: mfa:Mfla_0540 AraC family transcriptional regulator. (339 aa) |
| | Mmol_1621 | KEGG: pna:Pnap_2210 hypothetical protein. (161 aa) |
| | Mmol_1634 | KEGG: tbd:Tbd_2087 transmembrane protein. (129 aa) |
| | Mmol_1696 | KEGG: mfa:Mfla_0787 hypothetical protein. (307 aa) |
| | Mmol_1703 | KEGG: mfa:Mfla_0781 hypothetical protein. (147 aa) |
| | greA | Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides. (160 aa) |
| | Mmol_1815 | KEGG: mfa:Mfla_0700 hypothetical protein. (654 aa) |
| | Mmol_1919 | PFAM: protein of unknown function DUF81; KEGG: mfa:Mfla_1552 hypothetical protein. (343 aa) |
| | Mmol_1992 | KEGG: rfr:Rfer_0008 hypothetical protein. (73 aa) |
| | Mmol_2026 | KEGG: mfa:Mfla_2287 hypothetical protein. (518 aa) |
| | Mmol_2030 | KEGG: mfa:Mfla_2292 glycosyl transferase family protein. (550 aa) |
| | Mmol_2139 | KEGG: mfa:Mfla_2448 hypothetical protein. (166 aa) |
| | Mmol_2147 | TIGRFAM: type IV pilus secretin PilQ; PFAM: type II and III secretion system protein; Secretin/TonB short domain; NolW domain protein; KEGG: mfa:Mfla_2457 type II and III secretion system protein. (719 aa) |
| | Mmol_2148 | PFAM: Pilus assembly protein PilP; KEGG: mfa:Mfla_2458 type IV pilus assembly protein PilP. (166 aa) |
| | Mmol_2149 | PFAM: Pilus assembly protein PilO; KEGG: mfa:Mfla_2459 pilus assembly protein, PilO. (223 aa) |
| | Mmol_2150 | PFAM: Fimbrial assembly family protein; KEGG: mfa:Mfla_2460 fimbrial assembly. (199 aa) |
| | Mmol_2151 | TIGRFAM: type IV pilus assembly protein PilM; KEGG: mfa:Mfla_2461 type IV pilus assembly protein PilM. (357 aa) |
| | Mmol_2186 | PFAM: Peptidoglycan-binding LysM; SMART: Peptidoglycan-binding LysM; KEGG: mfa:Mfla_0188 peptidoglycan-binding LysM. (389 aa) |
| | Mmol_2187 | TIGRFAM: DNA protecting protein DprA; PFAM: SMF family protein; KEGG: mfa:Mfla_0189 DNA processing protein DprA, putative. (370 aa) |
| | Mmol_2221 | KEGG: mfa:Mfla_0206 hypothetical protein. (252 aa) |
| | Mmol_2249 | KEGG: mfa:Mfla_2487 hypothetical protein. (237 aa) |
| | Mmol_2269 | PFAM: Pyrrolo-quinoline quinone; SMART: Pyrrolo-quinoline quinone; KEGG: har:HEAR3112 hypothetical protein. (1461 aa) |
| | Mmol_2270 | KEGG: har:HEAR3113 hypothetical protein. (216 aa) |
| | Mmol_2271 | KEGG: dar:Daro_3038 hypothetical protein. (359 aa) |
| | Mmol_2272 | KEGG: dar:Daro_3039 hypothetical protein. (153 aa) |
| | Mmol_2273 | Conserved hypothetical protein; KEGG: mfa:Mfla_2522 methylation. (184 aa) |
| | Mmol_2274 | KEGG: dar:Daro_3041 general secretion pathway protein H. (147 aa) |
| | Mmol_2275 | Hypothetical protein. (39 aa) |
| | Mmol_2276 | Hypothetical protein. (40 aa) |
| | Mmol_2344 | PFAM: protein of unknown function DUF1508; KEGG: aci:ACIAD0721 hypothetical protein. (111 aa) |
