STRINGSTRING
EDC28_103385 EDC28_103385 EDC28_103376 EDC28_103376 EDC28_103375 EDC28_103375 EDC28_103200 EDC28_103200 EDC28_103186 EDC28_103186 fabZ fabZ accA accA GCA_001247655_00543 GCA_001247655_00543 EDC28_102422 EDC28_102422 EDC28_10792 EDC28_10792 EDC28_10760 EDC28_10760 EDC28_10745 EDC28_10745 EDC28_10744 EDC28_10744 EDC28_11295 EDC28_11295 EDC28_110114 EDC28_110114 EDC28_106100 EDC28_106100 EDC28_10683 EDC28_10683 EDC28_10628 EDC28_10628 EDC28_10626 EDC28_10626 EDC28_10625 EDC28_10625 EDC28_10624 EDC28_10624 EDC28_10623 EDC28_10623 EDC28_104285 EDC28_104285 EDC28_104286 EDC28_104286 EDC28_104326 EDC28_104326 EDC28_103480 EDC28_103480 EDC28_10295 EDC28_10295 EDC28_10283 EDC28_10283 EDC28_109175 EDC28_109175 ackA ackA EDC28_109173 EDC28_109173 EDC28_109172 EDC28_109172 EDC28_10195 EDC28_10195 EDC28_101110 EDC28_101110 EDC28_101146 EDC28_101146 EDC28_101191 EDC28_101191 EDC28_101217 EDC28_101217 GCA_001247655_02095 GCA_001247655_02095 EDC28_10142 EDC28_10142 fadB fadB fadA fadA EDC28_106114 EDC28_106114 EDC28_10447 EDC28_10447 GCA_001247655_02472 GCA_001247655_02472 GCA_001247655_02473 GCA_001247655_02473 GCA_001247655_02474 GCA_001247655_02474 GCA_001247655_02475 GCA_001247655_02475 GCA_001247655_02476 GCA_001247655_02476 GCA_001247655_02477 GCA_001247655_02477 GCA_001247655_02478 GCA_001247655_02478 GCA_001247655_02479 GCA_001247655_02479 GCA_001247655_02480 GCA_001247655_02480 GCA_001247655_02481 GCA_001247655_02481 GCA_001247655_02482 GCA_001247655_02482 GCA_001247655_02483 GCA_001247655_02483 GCA_001247655_02484 GCA_001247655_02484 GCA_001247655_02485 GCA_001247655_02485 GCA_001247655_02486 GCA_001247655_02486 GCA_001247655_02487 GCA_001247655_02487 GCA_001247655_02488 GCA_001247655_02488 GCA_001247655_02489 GCA_001247655_02489 EDC28_10449 EDC28_10449 EDC28_10450 EDC28_10450 EDC28_104128 EDC28_104128 EDC28_104129 EDC28_104129 EDC28_104133 EDC28_104133 acsA acsA EDC28_104177 EDC28_104177 fabA fabA EDC28_104212 EDC28_104212 acpP acpP EDC28_104214 EDC28_104214 EDC28_104215 EDC28_104215 fabH fabH plsX plsX EDC28_105269 EDC28_105269 accD accD EDC28_102262 EDC28_102262 EDC28_102275 EDC28_102275 fadI fadI EDC28_102283 EDC28_102283 EDC28_102340 EDC28_102340 EDC28_11345 EDC28_11345 EDC28_108169 EDC28_108169 fabV fabV EDC28_106288 EDC28_106288 EDC28_106287 EDC28_106287 EDC28_106286 EDC28_106286 EDC28_106280 EDC28_106280 EDC28_106279 EDC28_106279 EDC28_106278 EDC28_106278 EDC28_106277 EDC28_106277 EDC28_106276 EDC28_106276 EDC28_106275 EDC28_106275 EDC28_106274 EDC28_106274 EDC28_106273 EDC28_106273 EDC28_106272 EDC28_106272 EDC28_106271 EDC28_106271 EDC28_106270 EDC28_106270 EDC28_106269 EDC28_106269 EDC28_106268 EDC28_106268 EDC28_106163 EDC28_106163
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EDC28_103385Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (299 aa)
EDC28_103376Unannotated protein. (254 aa)
EDC28_103375Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (266 aa)
EDC28_103200Unannotated protein. (291 aa)
EDC28_103186Unannotated protein. (264 aa)
fabZUnannotated protein; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. (150 aa)
accAUnannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (318 aa)
GCA_001247655_00543Unannotated protein. (249 aa)
EDC28_102422Unannotated protein. (370 aa)
EDC28_10792Unannotated protein. (237 aa)
EDC28_10760Unannotated protein. (260 aa)
EDC28_10745Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (152 aa)
EDC28_10744Unannotated protein; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (451 aa)
EDC28_11295Unannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (423 aa)
EDC28_110114Unannotated protein. (266 aa)
EDC28_106100Unannotated protein. (559 aa)
EDC28_10683Unannotated protein. (776 aa)
EDC28_10628Unannotated protein. (247 aa)
EDC28_10626Unannotated protein. (321 aa)
EDC28_10625Unannotated protein. (230 aa)
EDC28_10624Unannotated protein. (218 aa)
EDC28_10623Unannotated protein. (246 aa)
EDC28_104285Unannotated protein. (165 aa)
EDC28_104286Unannotated protein. (688 aa)
EDC28_104326Unannotated protein. (245 aa)
EDC28_103480Unannotated protein. (256 aa)
EDC28_10295Unannotated protein. (290 aa)
EDC28_10283Unannotated protein. (333 aa)
EDC28_109175Unannotated protein. (252 aa)
ackAUnannotated protein; Catalyzes the formation of acetyl phosphate from acetate and ATP. Can also catalyze the reverse reaction; Belongs to the acetokinase family. (372 aa)
EDC28_109173Unannotated protein. (468 aa)
EDC28_109172Unannotated protein. (566 aa)
EDC28_10195Unannotated protein. (485 aa)
EDC28_101110Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
EDC28_101146Unannotated protein. (297 aa)
EDC28_101191Unannotated protein. (145 aa)
EDC28_101217Unannotated protein. (247 aa)
GCA_001247655_02095Unannotated protein. (293 aa)
EDC28_10142Unannotated protein. (280 aa)
fadBUnannotated protein; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (716 aa)
fadAUnannotated protein; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (388 aa)
EDC28_106114Unannotated protein. (253 aa)
EDC28_10447Unannotated protein. (231 aa)
GCA_001247655_02472Unannotated protein. (231 aa)
GCA_001247655_02473Unannotated protein. (274 aa)
GCA_001247655_02474Unannotated protein. (86 aa)
GCA_001247655_02475Unannotated protein. (82 aa)
GCA_001247655_02476Unannotated protein. (178 aa)
GCA_001247655_02477Unannotated protein. (411 aa)
GCA_001247655_02478Unannotated protein. (117 aa)
GCA_001247655_02479Unannotated protein. (559 aa)
GCA_001247655_02480Unannotated protein. (508 aa)
GCA_001247655_02481Unannotated protein. (139 aa)
GCA_001247655_02482Unannotated protein. (164 aa)
GCA_001247655_02483Unannotated protein. (706 aa)
GCA_001247655_02484Unannotated protein. (181 aa)
GCA_001247655_02485Unannotated protein. (388 aa)
GCA_001247655_02486Unannotated protein. (153 aa)
GCA_001247655_02487Unannotated protein. (241 aa)
GCA_001247655_02488Unannotated protein. (408 aa)
GCA_001247655_02489Unannotated protein. (418 aa)
EDC28_10449Unannotated protein. (132 aa)
EDC28_10450Unannotated protein. (139 aa)
EDC28_104128Unannotated protein. (256 aa)
EDC28_104129Unannotated protein. (284 aa)
EDC28_104133Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. (404 aa)
acsAUnannotated protein; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (645 aa)
EDC28_104177Unannotated protein. (245 aa)
fabAUnannotated protein; Necessary for the introduction of cis unsaturation into fatty acids. Catalyzes the dehydration of (3R)-3-hydroxydecanoyl-ACP to E- (2)-decenoyl-ACP and then its isomerization to Z-(3)-decenoyl-ACP. Can catalyze the dehydratase reaction for beta-hydroxyacyl-ACPs with saturated chain lengths up to 16:0, being most active on intermediate chain length. (172 aa)
EDC28_104212Unannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (412 aa)
acpPUnannotated protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (78 aa)
EDC28_104214Unannotated protein; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. (247 aa)
EDC28_104215Unannotated protein. (308 aa)
fabHUnannotated protein; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Catalyzes the first condensation reaction which initiates fatty acid synthesis and may therefore play a role in governing the total rate of fatty acid production. Possesses both acetoacetyl-ACP synthase and acetyl transacylase activities. Its substrate specificity determines the biosynthesis of branched-chain and/or straight-chain of fatty acids; Belongs to the thiolase-like superfamily. FabH family. (317 aa)
plsXUnannotated protein; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. (330 aa)
EDC28_105269Unannotated protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (235 aa)
accDUnannotated protein; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (289 aa)
EDC28_102262Unannotated protein; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. (404 aa)
EDC28_102275Unannotated protein; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (716 aa)
fadIUnannotated protein; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (437 aa)
EDC28_102283Unannotated protein. (234 aa)
EDC28_102340Unannotated protein. (820 aa)
EDC28_11345Unannotated protein. (311 aa)
EDC28_108169Unannotated protein. (534 aa)
fabVUnannotated protein; Involved in the final reduction of the elongation cycle of fatty acid synthesis (FAS II). Catalyzes the reduction of a carbon- carbon double bond in an enoyl moiety that is covalently linked to an acyl carrier protein (ACP); Belongs to the TER reductase family. (400 aa)
EDC28_106288Unannotated protein; Accepts electrons from ETF and reduces ubiquinone. (542 aa)
EDC28_106287Unannotated protein. (249 aa)
EDC28_106286Unannotated protein. (308 aa)
EDC28_106280Unannotated protein. (308 aa)
EDC28_106279Unannotated protein. (659 aa)
EDC28_106278Unannotated protein. (264 aa)
EDC28_106277Unannotated protein. (534 aa)
EDC28_106276Unannotated protein. (389 aa)
EDC28_106275Unannotated protein. (134 aa)
EDC28_106274Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. (390 aa)
EDC28_106273Unannotated protein. (496 aa)
EDC28_106272Unannotated protein. (385 aa)
EDC28_106271Unannotated protein; Belongs to the enoyl-CoA hydratase/isomerase family. (258 aa)
EDC28_106270Unannotated protein. (369 aa)
EDC28_106269Unannotated protein; Belongs to the HIBADH-related family. (291 aa)
EDC28_106268Unannotated protein. (252 aa)
EDC28_106163Unannotated protein; Belongs to the mandelate racemase/muconate lactonizing enzyme family. (388 aa)
Your Current Organism:
Gallaecimonas pentaromativorans
NCBI taxonomy Id: 584787
Other names: CECT 7479, DSM 21945, G. pentaromativorans, Gallaecimonas pentaromativorans Rodriguez-Blanco et al. 2010, gamma proteobacterium CEE_131, strain CEE_131
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