STRINGSTRING
EDC28_102149 EDC28_102149 EDC28_102172 EDC28_102172 EDC28_102275 EDC28_102275 fadI fadI EDC28_102340 EDC28_102340 EDC28_101394 EDC28_101394 EDC28_104324 EDC28_104324 EDC28_106274 EDC28_106274 EDC28_103263 EDC28_103263 EDC28_103166 EDC28_103166 EDC28_102503 EDC28_102503 EDC28_106100 EDC28_106100 EDC28_10683 EDC28_10683 EDC28_106270 EDC28_106270 fadB fadB EDC28_104133 EDC28_104133 EDC28_102147 EDC28_102147 EDC28_102148 EDC28_102148 EDC28_10283 EDC28_10283 EDC28_101110 EDC28_101110 EDC28_101113 EDC28_101113 EDC28_101353 EDC28_101353 fadA fadA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
EDC28_102149Unannotated protein. (426 aa)
EDC28_102172Unannotated protein. (396 aa)
EDC28_102275Unannotated protein; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (716 aa)
fadIUnannotated protein; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (437 aa)
EDC28_102340Unannotated protein. (820 aa)
EDC28_101394Unannotated protein. (440 aa)
EDC28_104324Unannotated protein. (55 aa)
EDC28_106274Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. (390 aa)
EDC28_103263Unannotated protein. (684 aa)
EDC28_103166Unannotated protein. (401 aa)
EDC28_102503Unannotated protein. (560 aa)
EDC28_106100Unannotated protein. (559 aa)
EDC28_10683Unannotated protein. (776 aa)
EDC28_106270Unannotated protein. (369 aa)
fadBUnannotated protein; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (716 aa)
EDC28_104133Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. (404 aa)
EDC28_102147Unannotated protein. (425 aa)
EDC28_102148Unannotated protein. (422 aa)
EDC28_10283Unannotated protein. (333 aa)
EDC28_101110Unannotated protein; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
EDC28_101113Unannotated protein; Belongs to the aldehyde dehydrogenase family. (478 aa)
EDC28_101353Unannotated protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (370 aa)
fadAUnannotated protein; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed. (388 aa)
Your Current Organism:
Gallaecimonas pentaromativorans
NCBI taxonomy Id: 584787
Other names: CECT 7479, DSM 21945, G. pentaromativorans, Gallaecimonas pentaromativorans Rodriguez-Blanco et al. 2010, gamma proteobacterium CEE_131, strain CEE_131
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